Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919344

Identifier: 238919344

GI number: 238919344

Start: 1414719

End: 1415651

Strand: Direct

Name: 238919344

Synonym: NT01EI_1438

Alternate gene names: NA

Gene position: 1414719-1415651 (Clockwise)

Preceding gene: 238919343

Following gene: 238919345

Centisome position: 37.11

GC content: 59.49

Gene sequence:

>933_bases
ATGTCTTATCCTGAGTGGCTGGATCTATTGGCCTGGGGCTGGTTAATCAGTGCGCTGATTTGTGCCTTAATTATCGCCTG
GGATATTGGCCGTGGGCATCCACAGCCGATGGCGATAATGACGGTTGCCTGGCCGATTAATGCGCTTTACTTTGGCGTAT
TGGGGCTGGGGGCCTATTTCTGGTTTGGCCGTGGCCATCCCGGCGATCGCTGCGGCATGATGGCGATGGATATGCCAATG
GCGGGCCACGGGGAGAAGCCGATGGTGATGGATATGCCGATGGCGGGCCACGGGGAGAAGCCGATGGCGATGGATATGCC
GATGGCGGGCCACGGGGAGAAGCCGATGGCGATGGATATGCCGATGGCGGGCCACGGGGAGAAGCCGATGGCGGGCCACG
GGGAGAAGCCGATGGCGATGGGTATGCCGATGGCGGGCCACGGGGAGAAGCCGATGGCGATGGATATGCCGATGGCGATG
AAGCGGGGTCCGGCAGGGTGGAAGAGTATCTTTAAGACCAGTACCCACTGCGGCACGGGGTGTACCCTGGCCGATATCCT
GGGCGAGGGGATCGCTCTGGTGGTGCCGGTGACGCTGTTAGGCAGCCCGCTGCTGGGATCGTGGACGCTGGATTTTGTGC
TGGCGCTGTGCCTGGGGATCTTCTTTCAGTATTGGCCTGCGCGTCAGATGGGACAGGCGCGCTGGGCCGCACTGAAGAGC
GCAGTTAAAGCGGATGTGCTCTCACTGATCTGTTGGCAGCTGGGAATGTATGTCTGGATGACGATTGCGCTGTTTCTCCT
GTTTACGCCGGAGATGCCGCGCGCCAGCGCGCTGTATTGGTTTATGATGCAGATTGCCATGATAGTGGGCTTCTGTAGTG
CGTATCCGATGAATAAGTGGTTGGTCAGCAAAGGGATTAAGCACGCGATGTAG

Upstream 100 bases:

>100_bases
CTGGCGGTAACGCAGCGGCGATAGGCCGTCTATTTTCTGTCGTGGTTTTGGCAGTGAGGCAGGATGACGGATGAATACGC
TGTATATTGAGGAGTAAATA

Downstream 100 bases:

>100_bases
CGCAGGTGAACGCCGCTGGCACTTTAAACATTATCCTATGTGCAACATGCCACGGTACGCGGGATCATGGCTATCCAGAT
TAGCGATATAGAGAGTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Protein

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYFWFGRGHPGDRCGMMAMDMPM
AGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDMPMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAM
KRGPAGWKSIFKTSTHCGTGCTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS
AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKWLVSKGIKHAM

Sequences:

>Translated_310_residues
MSYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYFWFGRGHPGDRCGMMAMDMPM
AGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDMPMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAM
KRGPAGWKSIFKTSTHCGTGCTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS
AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKWLVSKGIKHAM
>Mature_309_residues
SYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYFWFGRGHPGDRCGMMAMDMPMA
GHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDMPMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAMK
RGPAGWKSIFKTSTHCGTGCTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKSA
VKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKWLVSKGIKHAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34002; Mature: 33871

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
12.6 %Met     (Translated Protein)
14.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
12.3 %Met     (Mature Protein)
14.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
WFGRGHPGDRCGMMAMDMPMAGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDM
HCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCEECC
PMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAMKRGPAGWKSIFKTSTHCGTG
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCHHHHCCCHHHHHHHHCCCCCCCC
CTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS
CHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
LVSKGIKHAM
HHHHHHHHCC
>Mature Secondary Structure 
SYPEWLDLLAWGWLISALICALIIAWDIGRGHPQPMAIMTVAWPINALYFGVLGLGAYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
WFGRGHPGDRCGMMAMDMPMAGHGEKPMVMDMPMAGHGEKPMAMDMPMAGHGEKPMAMDM
HCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCEECC
PMAGHGEKPMAGHGEKPMAMGMPMAGHGEKPMAMDMPMAMKRGPAGWKSIFKTSTHCGTG
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCHHHHCCCHHHHHHHHCCCCCCCC
CTLADILGEGIALVVPVTLLGSPLLGSWTLDFVLALCLGIFFQYWPARQMGQARWAALKS
CHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AVKADVLSLICWQLGMYVWMTIALFLLFTPEMPRASALYWFMMQIAMIVGFCSAYPMNKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
LVSKGIKHAM
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA