Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919284

Identifier: 238919284

GI number: 238919284

Start: 1362693

End: 1363640

Strand: Direct

Name: 238919284

Synonym: NT01EI_1374

Alternate gene names: NA

Gene position: 1362693-1363640 (Clockwise)

Preceding gene: 238919283

Following gene: 238919286

Centisome position: 35.74

GC content: 53.16

Gene sequence:

>948_bases
GTGTCTAGCGCCGATCTGAGGCAGATCAAGGCAGAAAGGATATCACTGGATGACGAGGCGGCCATTAAGGCCATCAAGTC
CACCCTCATTGCCGATGTCACGCTGGCAAACTTCCCCTACTCCCAGAATCAGAACGAGCTTCGGGTGGCGACCACTAAGG
GGTGGGAGATCGGTGCGGGGAAACTGTTGCAGGATCAGAGCGTCGGTCCGGGGCAGAAGAATCTCGGTGAAAATGGCATC
CTCACCAAGAGTGGTTTAACGGCCTACCTCTTCATCAATGAGAGAACCAAGGAAGCACGCGTCGTCTTCGGTGGTACCAC
CTCCGGTGAAAAAGCGGGGGACCTGACTGCCCGAACCTGGGGTAACTTTGCCTCGACGGTCAGACAATGGCTGGCAAATA
TAAAGAATGTCTTCTCGGGTACACCGGACAGTTATCGAGAGGCAGCGCAACTGGTCAAAAACCTGAATCAGGAGTTGTCC
GGTTATACCTTGAGCGTATCGGGTCACTCCAAGGGGGGGGGCGAGTCCGCCTACGCCGCCATGATGCTGGGAGCACAAAT
TAAGAAGCCGGTAACATCGATAAACTTCTCCTCCGCCGAGCTTGGCCCGCAATTGAAGCGGGATATTGCCGATGAATTGG
CAAAAAATGGAGTACCACCCGAGGATATTGTCCGTGAGTTTAACGCGCTGAGCAGGGATATATTGCATGTCAATATTAAG
GGAGATCCTGTTCCGAGCATGCACAGGGTCTTTGGCAGCATTTCAAATATAGGAAAAACCCTGACCCTGCCCAATGATAA
TCAATCGGGCCTGCATCTTAGCGAACATGTCGACTTCTGTAGCCGCGTCACCAACTGGGCCCATTCGGAAACGATGACGC
ATCACCATCTGCTTGCCTACTTATTCCCTCCACCTGATCAGCTCGGTCAGGCGAATCGATACGGATAA

Upstream 100 bases:

>100_bases
GGCAAGCGGAGAGAGACAAGCCAGTACCAGCGGCTTACAACAGACCCCCAATGTCGCGGCTCCGCTTGCCTCCTCCAGGA
CTTCGCTCAATACGTCAGCA

Downstream 100 bases:

>100_bases
CGGAGATACTTTCGCGCCGTTGCTTGGACTGCCCCGGAGTCGGCGGTAAATTCTGTCCCCACGACGAGGCCTGTTTACAG
GCCTCGGTGCAGCCACAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSSADLRQIKAERISLDDEAAIKAIKSTLIADVTLANFPYSQNQNELRVATTKGWEIGAGKLLQDQSVGPGQKNLGENGI
LTKSGLTAYLFINERTKEARVVFGGTTSGEKAGDLTARTWGNFASTVRQWLANIKNVFSGTPDSYREAAQLVKNLNQELS
GYTLSVSGHSKGGGESAYAAMMLGAQIKKPVTSINFSSAELGPQLKRDIADELAKNGVPPEDIVREFNALSRDILHVNIK
GDPVPSMHRVFGSISNIGKTLTLPNDNQSGLHLSEHVDFCSRVTNWAHSETMTHHHLLAYLFPPPDQLGQANRYG

Sequences:

>Translated_315_residues
MSSADLRQIKAERISLDDEAAIKAIKSTLIADVTLANFPYSQNQNELRVATTKGWEIGAGKLLQDQSVGPGQKNLGENGI
LTKSGLTAYLFINERTKEARVVFGGTTSGEKAGDLTARTWGNFASTVRQWLANIKNVFSGTPDSYREAAQLVKNLNQELS
GYTLSVSGHSKGGGESAYAAMMLGAQIKKPVTSINFSSAELGPQLKRDIADELAKNGVPPEDIVREFNALSRDILHVNIK
GDPVPSMHRVFGSISNIGKTLTLPNDNQSGLHLSEHVDFCSRVTNWAHSETMTHHHLLAYLFPPPDQLGQANRYG
>Mature_314_residues
SSADLRQIKAERISLDDEAAIKAIKSTLIADVTLANFPYSQNQNELRVATTKGWEIGAGKLLQDQSVGPGQKNLGENGIL
TKSGLTAYLFINERTKEARVVFGGTTSGEKAGDLTARTWGNFASTVRQWLANIKNVFSGTPDSYREAAQLVKNLNQELSG
YTLSVSGHSKGGGESAYAAMMLGAQIKKPVTSINFSSAELGPQLKRDIADELAKNGVPPEDIVREFNALSRDILHVNIKG
DPVPSMHRVFGSISNIGKTLTLPNDNQSGLHLSEHVDFCSRVTNWAHSETMTHHHLLAYLFPPPDQLGQANRYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34202; Mature: 34071

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSADLRQIKAERISLDDEAAIKAIKSTLIADVTLANFPYSQNQNELRVATTKGWEIGAG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
KLLQDQSVGPGQKNLGENGILTKSGLTAYLFINERTKEARVVFGGTTSGEKAGDLTARTW
CEECCCCCCCCHHCCCCCCCEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHH
GNFASTVRQWLANIKNVFSGTPDSYREAAQLVKNLNQELSGYTLSVSGHSKGGGESAYAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH
MMLGAQIKKPVTSINFSSAELGPQLKRDIADELAKNGVPPEDIVREFNALSRDILHVNIK
HHHHHHHHCCHHHCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEC
GDPVPSMHRVFGSISNIGKTLTLPNDNQSGLHLSEHVDFCSRVTNWAHSETMTHHHLLAY
CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE
LFPPPDQLGQANRYG
ECCCHHHHCCCCCCC
>Mature Secondary Structure 
SSADLRQIKAERISLDDEAAIKAIKSTLIADVTLANFPYSQNQNELRVATTKGWEIGAG
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
KLLQDQSVGPGQKNLGENGILTKSGLTAYLFINERTKEARVVFGGTTSGEKAGDLTARTW
CEECCCCCCCCHHCCCCCCCEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHH
GNFASTVRQWLANIKNVFSGTPDSYREAAQLVKNLNQELSGYTLSVSGHSKGGGESAYAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH
MMLGAQIKKPVTSINFSSAELGPQLKRDIADELAKNGVPPEDIVREFNALSRDILHVNIK
HHHHHHHHCCHHHCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEC
GDPVPSMHRVFGSISNIGKTLTLPNDNQSGLHLSEHVDFCSRVTNWAHSETMTHHHLLAY
CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE
LFPPPDQLGQANRYG
ECCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA