Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919225

Identifier: 238919225

GI number: 238919225

Start: 1299205

End: 1300242

Strand: Direct

Name: 238919225

Synonym: NT01EI_1308

Alternate gene names: NA

Gene position: 1299205-1300242 (Clockwise)

Preceding gene: 238919224

Following gene: 238919226

Centisome position: 34.08

GC content: 31.79

Gene sequence:

>1038_bases
ATGAAAAAAATATTTTTTGTAATTACAAAATCAGAGATTGGCGGTGCGCAAAAGTGGATTGTTGAGCTATCCAATATTTT
AAAAGAACAATATGAAATTTTCATTATTACATCTGGAGATGGATGGCTAACATCAAAATTTGATTCATCTCACGTCATTC
TTTACCCAGGGTTATTGAATCTTAAGAGTATTTTTTGTTTTTTTAAATTGGCTAATATATTTCGGAAATATAAAGCTGAT
ATCGTTATTTCAAGCTCTGCAAATGCTGGGGTTTATGCGAGGTTATCTAAATTCCTATATTCTCATAAAAGCATTTATGT
TTCCCATGGATGGTCTTGTCTTTATAATGGCGGAAGATTAAAAAAGATACAGTGCTTGGTTGAAAGATTTCTATCATTAA
TTTCAGATAAAATACTATGTGTTTCTGAGAATGATATGAATAATGCTATAAAATTTATAGGGATAAAAGAAAAAAAATTA
TTTGTCATTAGAAATGGTGTTAGCCCCCTGAAAAAAAAGAATGTTATTAATGTGAGAAAGAAAGTCCTCTTTGTTGGAAG
AATGATTCATCCCAAAAGACCCGATTTGTTCGTCGCTGTAGCAGACAGTTTTCCTGATGTGGATTTTTATCTGGTAGGTG
ATGGTCCTCTAAAACAAAGGTTAGAGACATCCTGTCAACATAATAATGTTTATTTTCTTGGCGAGATTAATGGGTTTGAC
AGTTTTCAGTGCTATGATATTTTTGTACTTTGTTCTGATAGTGAAGGTTTACCTATGTCAGCATTGGAAGCCGCTTCTTC
TGGGGTGCCTATTTTATTAAGTGATGTAGGTGGTTGTTCTGAACTAATTACTTTAATGAATAATGGATGTAGTAATGGCG
AGTTATTTTCTAATGATATATCTTCGTTAAGATGTAAGTTAGGTGCTGTTTTGCTTGAATATGATAAATATTTTTCATCT
GCTCAGGTTGTAAGCGGTTGCTTTGATATAAACAATCTTGCTGAAAAATATATTGAATTAATTGAGGGTGATAAATGA

Upstream 100 bases:

>100_bases
AAAGCGAAAAACAAAGACCATTGTGAGAACCAATTTTCCATTGGGGCTATAATTAATAATTGGTATGCCATTTATAATGG
GATAAGATCGAAATTATAAT

Downstream 100 bases:

>100_bases
AATTAGCAATCATTGGCGGTTCTGGTTTTATCGGTACGCGTCTGGCTACGCAGTTAAAAAATAATAATGTTGAATTTACT
ATTGTTGATAAACGAAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Family; Galactosyltransferase WbgM; Glycosyl Transferase Family Protein; Glycosyltransferase Protein; Group 1 Glycosyl Transferase; A-Glycosyltransferase; Group 1 Family Glycosyltransferase; WclR Protein; Exopolysaccharide Biosynthesis Protein; Glycosyltransferase Group 1 Family; Second Mannosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Exopolysaccharide Biosynthesis Protein Glycosyltransferase; Glycosyl Transferase Group 1/2 Family Protein; LPS Biosynthesis Related Glycosyltransferase; Glycosyltransferase Involved Exopolysaccharide Synthesis; Galactosyl Transferase; Hexosyltransferase; Glycosyltransferase Group 1 Family Protein

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLNLKSIFCFFKLANIFRKYKAD
IVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRLKKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKL
FVIRNGVSPLKKKNVINVRKKVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD
SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDISSLRCKLGAVLLEYDKYFSS
AQVVSGCFDINNLAEKYIELIEGDK

Sequences:

>Translated_345_residues
MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLNLKSIFCFFKLANIFRKYKAD
IVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRLKKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKL
FVIRNGVSPLKKKNVINVRKKVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD
SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDISSLRCKLGAVLLEYDKYFSS
AQVVSGCFDINNLAEKYIELIEGDK
>Mature_345_residues
MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLNLKSIFCFFKLANIFRKYKAD
IVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRLKKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKL
FVIRNGVSPLKKKNVINVRKKVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD
SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDISSLRCKLGAVLLEYDKYFSS
AQVVSGCFDINNLAEKYIELIEGDK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38608; Mature: 38608

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLN
CCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEECCHHH
LKSIFCFFKLANIFRKYKADIVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRL
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEECCCCH
KKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKLFVIRNGVSPLKKKNVINVRK
HHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHCCHHHHHH
KVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD
HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCC
SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDI
CEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHH
SSLRCKLGAVLLEYDKYFSSAQVVSGCFDINNLAEKYIELIEGDK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLN
CCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEECCHHH
LKSIFCFFKLANIFRKYKADIVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRL
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEECCCCH
KKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKLFVIRNGVSPLKKKNVINVRK
HHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHCCHHHHHH
KVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD
HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCC
SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDI
CEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHH
SSLRCKLGAVLLEYDKYFSSAQVVSGCFDINNLAEKYIELIEGDK
HHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA