| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is 238917347
Identifier: 238917347
GI number: 238917347
Start: 1477316
End: 1478575
Strand: Reverse
Name: 238917347
Synonym: EUBELI_01424
Alternate gene names: NA
Gene position: 1478575-1477316 (Counterclockwise)
Preceding gene: 238917348
Following gene: 238917346
Centisome position: 68.96
GC content: 42.3
Gene sequence:
>1260_bases ATGAGCAGAGTATTAGTAATTGGTTGCGGAGGAGTTGCTTCAGTAGCAATCCACAAGATATGTCAGGTGAGCGAGGTGTT TTCAGACCTGTGCATAGCGAGCAGAACAGTGAGCAAATGTGACAAATTAGCAGACGAATTGAAGGGTAAGACAAGTACTA ACATCACAACAGCAAAGGTTGATGCTGACAACACAGATGAGGTTATTGCGCTTATCAATGAATTCAAGCCGGATGTAGTT CTTAATGTGGCACTTCCATATCAGGACCTTACGATTATGGATGCCTGCCTTGCATGTAAAGTTCCTTATGTTGATACTGC TAATTACGAGTGTGAGGATACAGACAATCCTGAGTGGAGAAAGGTATATGAGGAGAGATGCAAGCGTCTTGGATTTACAG CATATTTTGACTACTCATGGCAGTGGGCTTACAGAGAAAAATATAAAGAAGCCGGAATTACAGCACTTTTAGGAACTGGT TTTGACCCGGGTGTAACAAGCGTATTCACAGCTTATGCACAGAAACACTATTTTGATGAGATACATACAATTGATATATT AGACTGCAACGGCGGCGACCATGGATATCCGTTTGCAACTAACTTTAACCCGGAGATTAATCTTCGTGAGGTATCAGCAC CAGGCTCATACTGGGAGGATGGTCACTGGGTTGAGATTCCTGCTATGTCAATAAAGAGAGAGTATAATTTTGAGGGAGTA GGAATGAAGGATATGTACCTGCTTCACCATGAGGAAATAGAGGCACTTGCTGCTAATATTCCGCATGTTAAGAGAATACG TTTCTTCATGACATTTGGACAGAGCTATCTTACACATATGAAATGCCTTGAGAATGTCGGAATGTTAAGAACTGACCCGG TTGAATTCAACGGACAGGAGATAGTTCCAATCCAGTTCTTAAAGGCACTTCTTCCAGACCCTGCTTCACTTGGACCAAGA ACAGTAGGTAAGACTAATATCGGCTGTATCTTCACAGGTATCAAAGACGGCAAGGAGAAGAAGGTATATATTTACAATGT GTGTGACCATCAGGAATGTTACCGTGAGGTAGGTTCACAGGCTATTTCGTACACAACAGGCGTACCTGCTATGATTGGTA CAATGCTTGTTGCAAAGGGACTCTGGAATAAGCCGGGAGTATTCACAACAGATGAATTTGATCCGGATCCATACATGGAT GCGCTTAATAAGTACGGTCTTCCATGGGTTGTCGATGAAAATCCTGTTTTAGTAGACTAA
Upstream 100 bases:
>100_bases GAAGAAATATACATACAGAATATTACACAACTAATCTTCATACAGGTGCATTCATGCTGCCAAAGTATGTTGAAGAATTA TTAGAACAGGAGGAAGAAAG
Downstream 100 bases:
>100_bases AAAGAGAGGTTAATTATGAGATTTGATGAGTTAAAGACACCGGCATATGTAATAGATGAAAAAATGCTTATTCATAATCT TGAGATACTTCATAAAGTAG
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSRVLVIGCGGVASVAIHKICQVSEVFSDLCIASRTVSKCDKLADELKGKTSTNITTAKVDADNTDEVIALINEFKPDVV LNVALPYQDLTIMDACLACKVPYVDTANYECEDTDNPEWRKVYEERCKRLGFTAYFDYSWQWAYREKYKEAGITALLGTG FDPGVTSVFTAYAQKHYFDEIHTIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYWEDGHWVEIPAMSIKREYNFEGV GMKDMYLLHHEEIEALAANIPHVKRIRFFMTFGQSYLTHMKCLENVGMLRTDPVEFNGQEIVPIQFLKALLPDPASLGPR TVGKTNIGCIFTGIKDGKEKKVYIYNVCDHQECYREVGSQAISYTTGVPAMIGTMLVAKGLWNKPGVFTTDEFDPDPYMD ALNKYGLPWVVDENPVLVD
Sequences:
>Translated_419_residues MSRVLVIGCGGVASVAIHKICQVSEVFSDLCIASRTVSKCDKLADELKGKTSTNITTAKVDADNTDEVIALINEFKPDVV LNVALPYQDLTIMDACLACKVPYVDTANYECEDTDNPEWRKVYEERCKRLGFTAYFDYSWQWAYREKYKEAGITALLGTG FDPGVTSVFTAYAQKHYFDEIHTIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYWEDGHWVEIPAMSIKREYNFEGV GMKDMYLLHHEEIEALAANIPHVKRIRFFMTFGQSYLTHMKCLENVGMLRTDPVEFNGQEIVPIQFLKALLPDPASLGPR TVGKTNIGCIFTGIKDGKEKKVYIYNVCDHQECYREVGSQAISYTTGVPAMIGTMLVAKGLWNKPGVFTTDEFDPDPYMD ALNKYGLPWVVDENPVLVD >Mature_418_residues SRVLVIGCGGVASVAIHKICQVSEVFSDLCIASRTVSKCDKLADELKGKTSTNITTAKVDADNTDEVIALINEFKPDVVL NVALPYQDLTIMDACLACKVPYVDTANYECEDTDNPEWRKVYEERCKRLGFTAYFDYSWQWAYREKYKEAGITALLGTGF DPGVTSVFTAYAQKHYFDEIHTIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYWEDGHWVEIPAMSIKREYNFEGVG MKDMYLLHHEEIEALAANIPHVKRIRFFMTFGQSYLTHMKCLENVGMLRTDPVEFNGQEIVPIQFLKALLPDPASLGPRT VGKTNIGCIFTGIKDGKEKKVYIYNVCDHQECYREVGSQAISYTTGVPAMIGTMLVAKGLWNKPGVFTTDEFDPDPYMDA LNKYGLPWVVDENPVLVD
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47063; Mature: 46932
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVLVIGCGGVASVAIHKICQVSEVFSDLCIASRTVSKCDKLADELKGKTSTNITTAKV CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE DADNTDEVIALINEFKPDVVLNVALPYQDLTIMDACLACKVPYVDTANYECEDTDNPEWR CCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH KVYEERCKRLGFTAYFDYSWQWAYREKYKEAGITALLGTGFDPGVTSVFTAYAQKHYFDE HHHHHHHHHCCCEEEECCCEEEHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCC IHTIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYWEDGHWVEIPAMSIKREYNFEGV CCEEEEEECCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHCCCCCCC GMKDMYLLHHEEIEALAANIPHVKRIRFFMTFGQSYLTHMKCLENVGMLRTDPVEFNGQE CCHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE IVPIQFLKALLPDPASLGPRTVGKTNIGCIFTGIKDGKEKKVYIYNVCDHQECYREVGSQ ECHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHH AISYTTGVPAMIGTMLVAKGLWNKPGVFTTDEFDPDPYMDALNKYGLPWVVDENPVLVD HEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEC >Mature Secondary Structure SRVLVIGCGGVASVAIHKICQVSEVFSDLCIASRTVSKCDKLADELKGKTSTNITTAKV CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE DADNTDEVIALINEFKPDVVLNVALPYQDLTIMDACLACKVPYVDTANYECEDTDNPEWR CCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH KVYEERCKRLGFTAYFDYSWQWAYREKYKEAGITALLGTGFDPGVTSVFTAYAQKHYFDE HHHHHHHHHCCCEEEECCCEEEHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCC IHTIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYWEDGHWVEIPAMSIKREYNFEGV CCEEEEEECCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHCCCCCCC GMKDMYLLHHEEIEALAANIPHVKRIRFFMTFGQSYLTHMKCLENVGMLRTDPVEFNGQE CCHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE IVPIQFLKALLPDPASLGPRTVGKTNIGCIFTGIKDGKEKKVYIYNVCDHQECYREVGSQ ECHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHH AISYTTGVPAMIGTMLVAKGLWNKPGVFTTDEFDPDPYMDALNKYGLPWVVDENPVLVD HEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA