Click here to switch to the map view.

The map label for this gene is 238917346

Identifier: 238917346

GI number: 238917346

Start: 1476071

End: 1477300

Strand: Reverse

Name: 238917346

Synonym: EUBELI_01423

Alternate gene names: NA

Gene position: 1477300-1476071 (Counterclockwise)

Preceding gene: 238917347

Following gene: 238917345

Centisome position: 68.9

GC content: 39.02

Gene sequence:

>1230_bases
ATGAGATTTGATGAGTTAAAGACACCGGCATATGTAATAGATGAAAAAATGCTTATTCATAATCTTGAGATACTTCATAA
AGTAGAAGAAGATACCGGCTGCCACATACTGCTGGCGCAGAAAGCATTTTCAGCATATGCAGAATATCCGCTGATTGGAA
AATATATAAGCGGAACTACGGCAAGTGGAATATATGAAGCCAGACTTGGTGCTGAGTGTATGGGAAAAGAAAATCATGTA
TTTGCACCGGCATTTACTGATGAGGATATGGATGAGCTTGTAAATATATGTGACCATGTTGTCTTTAACTCAGTTTCACA
GTTAAAGAAGCATAAAGCCAGATGTATTGAGGCTGGAGTAAGCTTTGGACTTCGAGTTAATCCAGAGTTTTCTACACAGG
GTGACCATGCAATATATGACCCATGCGCGCCGGGCAGCAGACTTGGAGTTACACTTAAGAACCTGAAAGCTGCACTTGAG
GAAGAACCTGATGTGTTATCAGGTATGGAAGGAATACATTTTCATACATTATGTGAGCAGAATTCAGATGACTTAGAGGC
AACATTAAAGGCTGTTGAAGAGAAATTCGGATTTCTCATGAAAGATATGAAGTGGGTTAATTTTGGCGGCGGACATCATA
TAACCCGTGAAGATTACGACATTGAAACTCTTGAAAAATGTATCAGTCATGTAAAAAAGAAATATGATGTGCAGGTGTAT
GTTGAACCGGGGGAAGCTGTTGCACTTAATGCAGGATATCTTGTGACTACAGTGCTTGATAAGGTTGAAAATGGAATAAC
AACTCTTATACTTGATGCATCTGCAGCGTGTCATATGCCAGATGTACTGGAAATGCCATATACACCACCTCTTCGTGGTG
GATTGAAAATATCGGACATGGAAGATGAGTATGGAATTGATAAGGACATAGAGATTGATTTTGATATGGACGTAAAAGAA
GGTATATGGAAACCGGCGAAGAATGGAAGATACAGATACAGACTGTCATCTTATACATGTCTTGCAGGAGATATCATAGG
TGATTATCAATTCGGCAGGGAAATCAATGTCGGGGACAGACTCGTATTTGAAGATATGGCTATATATTCAATGGTTAAGA
ACAATACATTTAACGGAATCCAGCTGCCGGATATTGTAATTATGGATAGTGATGGAGAATGTAAGGTATGGAAGCATTTT
GGCTATGAAGATTTCAAAGGGAGATTATAG

Upstream 100 bases:

>100_bases
ATTTGATCCGGATCCATACATGGATGCGCTTAATAAGTACGGTCTTCCATGGGTTGTCGATGAAAATCCTGTTTTAGTAG
ACTAAAAAGAGAGGTTAATT

Downstream 100 bases:

>100_bases
ATATGGATTATATTAACAGTACTCCGGCAGCAGATGGTTTTCGCATGCCTGCTGAATTTGAAAGACATCAGGGCTGCATT
ATGATATGGCCGGAAAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRFDELKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTTASGIYEARLGAECMGKENHV
FAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGVSFGLRVNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALE
EEPDVLSGMEGIHFHTLCEQNSDDLEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVY
VEPGEAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDMEDEYGIDKDIEIDFDMDVKE
GIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDRLVFEDMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHF
GYEDFKGRL

Sequences:

>Translated_409_residues
MRFDELKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTTASGIYEARLGAECMGKENHV
FAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGVSFGLRVNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALE
EEPDVLSGMEGIHFHTLCEQNSDDLEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVY
VEPGEAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDMEDEYGIDKDIEIDFDMDVKE
GIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDRLVFEDMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHF
GYEDFKGRL
>Mature_409_residues
MRFDELKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTTASGIYEARLGAECMGKENHV
FAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGVSFGLRVNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALE
EEPDVLSGMEGIHFHTLCEQNSDDLEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVY
VEPGEAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDMEDEYGIDKDIEIDFDMDVKE
GIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDRLVFEDMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHF
GYEDFKGRL

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45975; Mature: 45975

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDELKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTT
CCCCHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCEEHHHCCCC
ASGIYEARLGAECMGKENHVFAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGV
CCCCHHHHCCHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SFGLRVNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALEEEPDVLSGMEGIHFHTLCEQ
CCCEEECCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHCCCHHHHCCCCCEEEEHHCC
NSDDLEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVY
CCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE
VEPGEAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDM
EECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEECC
EDEYGIDKDIEIDFDMDVKEGIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDR
CHHCCCCCCEEEEECCCHHHCCCCCCCCCEEEEEECCEEEEECCHHCCHHCCCCCCCCCC
LVFEDMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHFGYEDFKGRL
HHHHHHHHHHHHHCCCCCCEECCEEEEECCCCCEEEEECCCCHHCCCCC
>Mature Secondary Structure
MRFDELKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTT
CCCCHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCEEHHHCCCC
ASGIYEARLGAECMGKENHVFAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGV
CCCCHHHHCCHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SFGLRVNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALEEEPDVLSGMEGIHFHTLCEQ
CCCEEECCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHCCCHHHHCCCCCEEEEHHCC
NSDDLEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVY
CCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE
VEPGEAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDM
EECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCEEEECC
EDEYGIDKDIEIDFDMDVKEGIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDR
CHHCCCCCCEEEEECCCHHHCCCCCCCCCEEEEEECCEEEEECCHHCCHHCCCCCCCCCC
LVFEDMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHFGYEDFKGRL
HHHHHHHHHHHHHCCCCCCEECCEEEEECCCCCEEEEECCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA