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The map label for this gene is rbgA [H]

Identifier: 238916978

GI number: 238916978

Start: 1059324

End: 1060235

Strand: Reverse

Name: rbgA [H]

Synonym: EUBELI_01047

Alternate gene names: 238916978

Gene position: 1060235-1059324 (Counterclockwise)

Preceding gene: 238916979

Following gene: 238916977

Centisome position: 49.45

GC content: 36.18

Gene sequence:

>912_bases
ATGGAGATATATATGGAAGAGAAGAAAAGAGCCATTAACTGGTATCCTGGTCATATGACTAAGGCCAGAAGAATGATGGA
AGAAGATATAAAGCTTGTTGATCTTGTTATTGAGATTGTGGATGCAAGAATACCGTTAAGCAGCCGTAATCCGGATATTG
ATAAGCTGGCTAAAAATAAGGCACGTATTGTATTATTGAATAAATCGGACCTTGCAGATGACACAGTAACGGATGAATGG
ATAACATATTTTAAAGATAAAGGCTTTTACTGCCTCAAGCTTAACTCAAGACTCAATGTAAGCAACCGTGCAGTTAATAA
TCTTATAACTGTTGCATGTTCTGCTAAGATTGAAAGAGACAGAGCAAGAGGAATTAAGAACCGTTCCATCAAAGCTATGA
TTGTTGGAATACCTAATGTTGGTAAATCAACATTTATTAATTCATTCACCGGAAGAAAGAGTGCCAAGACAGGTAATAAG
CCGGGTGTTACAAAAGGAAAGCAATGGATAAGAATTAATGGAAGTGTTGAGCTGCTTGACACACCGGGTATACTCTGGCC
TAAGATAGAAGACAGAAATGTCGGTGAAAGACTTGCGATGATTGGTTCAATTAATGACCAGATTCTTAATATTGAGGAGC
TTGCATTAGAAACTATAAAGTTTCTTAAGAAGAATTATCAGCCGCAGCTTTATAGCCGTTATGATATAACAGAAGATATA
TTTGATAATGTTGATACTGAAACAATGATGAATCCTGAAAATGCTGCTGCACTCTGTATTATGGAACATATTGCCAGAAA
ACGTGGCTGTATTAAGAAAGGCTCAGATATTGATTATGAAAAATGTGCTGCATGTATTCTTGATGATTTCAGAGAAGGAA
AGATTGGTACAATCTCACTTGAAAGACCTTAA

Upstream 100 bases:

>100_bases
ATAGCCGTTTTGCCAGTGTTGGAATGGTTAAACGTAAGAATGTTGTAGGAAAAGTATGGATGGTAATAGAACCGTTTGAT
TCATTTGGTTTTGTTAAATA

Downstream 100 bases:

>100_bases
AGATACCGGAAAGGAAAGCTATGACACTTAAAGAGGAACGTGAACTTAAAAAAGCAGCAAAGCTGGAGGCTGAGAAACAG
CGTATTGAAGCTATGCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEIYMEEKKRAINWYPGHMTKARRMMEEDIKLVDLVIEIVDARIPLSSRNPDIDKLAKNKARIVLLNKSDLADDTVTDEW
ITYFKDKGFYCLKLNSRLNVSNRAVNNLITVACSAKIERDRARGIKNRSIKAMIVGIPNVGKSTFINSFTGRKSAKTGNK
PGVTKGKQWIRINGSVELLDTPGILWPKIEDRNVGERLAMIGSINDQILNIEELALETIKFLKKNYQPQLYSRYDITEDI
FDNVDTETMMNPENAAALCIMEHIARKRGCIKKGSDIDYEKCAACILDDFREGKIGTISLERP

Sequences:

>Translated_303_residues
MEIYMEEKKRAINWYPGHMTKARRMMEEDIKLVDLVIEIVDARIPLSSRNPDIDKLAKNKARIVLLNKSDLADDTVTDEW
ITYFKDKGFYCLKLNSRLNVSNRAVNNLITVACSAKIERDRARGIKNRSIKAMIVGIPNVGKSTFINSFTGRKSAKTGNK
PGVTKGKQWIRINGSVELLDTPGILWPKIEDRNVGERLAMIGSINDQILNIEELALETIKFLKKNYQPQLYSRYDITEDI
FDNVDTETMMNPENAAALCIMEHIARKRGCIKKGSDIDYEKCAACILDDFREGKIGTISLERP
>Mature_303_residues
MEIYMEEKKRAINWYPGHMTKARRMMEEDIKLVDLVIEIVDARIPLSSRNPDIDKLAKNKARIVLLNKSDLADDTVTDEW
ITYFKDKGFYCLKLNSRLNVSNRAVNNLITVACSAKIERDRARGIKNRSIKAMIVGIPNVGKSTFINSFTGRKSAKTGNK
PGVTKGKQWIRINGSVELLDTPGILWPKIEDRNVGERLAMIGSINDQILNIEELALETIKFLKKNYQPQLYSRYDITEDI
FDNVDTETMMNPENAAALCIMEHIARKRGCIKKGSDIDYEKCAACILDDFREGKIGTISLERP

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=307, Percent_Identity=29.3159609120521, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI296317324, Length=323, Percent_Identity=25.3869969040248, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI9506611, Length=323, Percent_Identity=25.3869969040248, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI7019419, Length=266, Percent_Identity=24.4360902255639, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193211047, Length=214, Percent_Identity=32.2429906542056, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17534827, Length=282, Percent_Identity=28.3687943262411, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32563985, Length=260, Percent_Identity=25.7692307692308, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71990926, Length=260, Percent_Identity=25.7692307692308, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI32563983, Length=260, Percent_Identity=25.7692307692308, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6320842, Length=303, Percent_Identity=27.3927392739274, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324381, Length=282, Percent_Identity=26.241134751773, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323744, Length=222, Percent_Identity=29.2792792792793, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI85815858, Length=316, Percent_Identity=28.4810126582279, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28572990, Length=237, Percent_Identity=30.379746835443, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI19922460, Length=299, Percent_Identity=24.7491638795987, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 34476; Mature: 34476

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIYMEEKKRAINWYPGHMTKARRMMEEDIKLVDLVIEIVDARIPLSSRNPDIDKLAKNK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
ARIVLLNKSDLADDTVTDEWITYFKDKGFYCLKLNSRLNVSNRAVNNLITVACSAKIERD
CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEEEEHHHHHHHH
RARGIKNRSIKAMIVGIPNVGKSTFINSFTGRKSAKTGNKPGVTKGKQWIRINGSVELLD
HHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEE
TPGILWPKIEDRNVGERLAMIGSINDQILNIEELALETIKFLKKNYQPQLYSRYDITEDI
CCCEECCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
FDNVDTETMMNPENAAALCIMEHIARKRGCIKKGSDIDYEKCAACILDDFREGKIGTISL
HCCCCHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE
ERP
CCC
>Mature Secondary Structure
MEIYMEEKKRAINWYPGHMTKARRMMEEDIKLVDLVIEIVDARIPLSSRNPDIDKLAKNK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
ARIVLLNKSDLADDTVTDEWITYFKDKGFYCLKLNSRLNVSNRAVNNLITVACSAKIERD
CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEEEEHHHHHHHH
RARGIKNRSIKAMIVGIPNVGKSTFINSFTGRKSAKTGNKPGVTKGKQWIRINGSVELLD
HHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEE
TPGILWPKIEDRNVGERLAMIGSINDQILNIEELALETIKFLKKNYQPQLYSRYDITEDI
CCCEECCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
FDNVDTETMMNPENAAALCIMEHIARKRGCIKKGSDIDYEKCAACILDDFREGKIGTISL
HCCCCHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE
ERP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]