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The map label for this gene is nrnA [H]

Identifier: 238916828

GI number: 238916828

Start: 907065

End: 908021

Strand: Direct

Name: nrnA [H]

Synonym: EUBELI_00896

Alternate gene names: 238916828

Gene position: 907065-908021 (Clockwise)

Preceding gene: 238916827

Following gene: 238916829

Centisome position: 42.3

GC content: 36.68

Gene sequence:

>957_bases
ATGAATATTATTGAAGAAATCGGACATGCAAAGGTTATAGGTATCACAGGACATATCCGTCCTGATGGTGACTGTGTTGG
TTCAACATTAGGTTTATATAATTATATCAGGAAGAATCTTCCTGAGTGCGAGGTTACTGTTTATCTTGAAAAGCCGTCAG
ATGAATTTAATTATTTATCTGGTATTAATGATATTAAGCATGAGGCTGAGGATAAGCATTTTGATTTATTCGTAGTACTT
GACTGCAGTTCAATGGATAGAATTGAACCATTTATGAGCTGCTTTGAAAATGCTGATAAGACTATCTGCATAGATCATCA
TATAAGCAATAATTCATTTGCTGATGTTAATTATGTAGAGCCACAGTCAAGTTCGGCATGTGAAGTTCTCTATACAACAT
TTGACGAGGATAAGGTCGATAAAAATGTTGCAGAGTGCATATACACAGGAATAATCCATGATACAGGTGTGTTTAAGTAC
AGCTGTACATCAAGAAGGACAATGGATATAGCTGGAAAGATGATGGAGATGGGAATTGATTATTCTGACATTATCGATAA
CAGCTTTTATAAGAAGAGTTATATCCAGAACCAGATTCTTGGAAGAGCTTTGCTTGAAAGTGTGTTGTTTTATGATGGCA
GATGTATATTTTCAAGTGTATCTATTGAAGAAATGAATTTCTATGGGGTCACTGGCAAAGAACTTGGTGGAATTATTGAG
CAGTTACGCTTAACAGACGGAGTTGAAGTGGCTATATTCCTTTATGAAACAGATAAGGACGAATACAAAGTAAGTCTTCG
TTCAAAGAAAATGATTGATGTTGCAAGAATCGCCACAGCATTTGGCGGTGGAGGACATGTGAGGGCAGCAGGATTCTCTG
CTAAGGGCAATGTCCACAGTATCGTTAATAAGATTGGCGAAATGATTGAGCAGCAGTATAATGAGGATAATGCATGA

Upstream 100 bases:

>100_bases
AGTATGGTATTAATATGTCTAAGCTTATTGATGAAGTTACAGAACATGATAATAAGATGCACGTTGAGGTTGAAGACGAG
ACAGAATAAAGAGGTTAGTC

Downstream 100 bases:

>100_bases
ATGGTGTTTTAAATGTATATAAGGAGCAGGGATTTACATCTCATGATGTAGTTGCAAAGCTTCGGGGAATACTTAAAACT
AAAAAAATTGGTCACACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MNIIEEIGHAKVIGITGHIRPDGDCVGSTLGLYNYIRKNLPECEVTVYLEKPSDEFNYLSGINDIKHEAEDKHFDLFVVL
DCSSMDRIEPFMSCFENADKTICIDHHISNNSFADVNYVEPQSSSACEVLYTTFDEDKVDKNVAECIYTGIIHDTGVFKY
SCTSRRTMDIAGKMMEMGIDYSDIIDNSFYKKSYIQNQILGRALLESVLFYDGRCIFSSVSIEEMNFYGVTGKELGGIIE
QLRLTDGVEVAIFLYETDKDEYKVSLRSKKMIDVARIATAFGGGGHVRAAGFSAKGNVHSIVNKIGEMIEQQYNEDNA

Sequences:

>Translated_318_residues
MNIIEEIGHAKVIGITGHIRPDGDCVGSTLGLYNYIRKNLPECEVTVYLEKPSDEFNYLSGINDIKHEAEDKHFDLFVVL
DCSSMDRIEPFMSCFENADKTICIDHHISNNSFADVNYVEPQSSSACEVLYTTFDEDKVDKNVAECIYTGIIHDTGVFKY
SCTSRRTMDIAGKMMEMGIDYSDIIDNSFYKKSYIQNQILGRALLESVLFYDGRCIFSSVSIEEMNFYGVTGKELGGIIE
QLRLTDGVEVAIFLYETDKDEYKVSLRSKKMIDVARIATAFGGGGHVRAAGFSAKGNVHSIVNKIGEMIEQQYNEDNA
>Mature_318_residues
MNIIEEIGHAKVIGITGHIRPDGDCVGSTLGLYNYIRKNLPECEVTVYLEKPSDEFNYLSGINDIKHEAEDKHFDLFVVL
DCSSMDRIEPFMSCFENADKTICIDHHISNNSFADVNYVEPQSSSACEVLYTTFDEDKVDKNVAECIYTGIIHDTGVFKY
SCTSRRTMDIAGKMMEMGIDYSDIIDNSFYKKSYIQNQILGRALLESVLFYDGRCIFSSVSIEEMNFYGVTGKELGGIIE
QLRLTDGVEVAIFLYETDKDEYKVSLRSKKMIDVARIATAFGGGGHVRAAGFSAKGNVHSIVNKIGEMIEQQYNEDNA

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 35688; Mature: 35688

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIEEIGHAKVIGITGHIRPDGDCVGSTLGLYNYIRKNLPECEVTVYLEKPSDEFNYLS
CCHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
GINDIKHEAEDKHFDLFVVLDCSSMDRIEPFMSCFENADKTICIDHHISNNSFADVNYVE
CCHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEC
PQSSSACEVLYTTFDEDKVDKNVAECIYTGIIHDTGVFKYSCTSRRTMDIAGKMMEMGID
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCC
YSDIIDNSFYKKSYIQNQILGRALLESVLFYDGRCIFSSVSIEEMNFYGVTGKELGGIIE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEECCEEECCCHHHHHHHHH
QLRLTDGVEVAIFLYETDKDEYKVSLRSKKMIDVARIATAFGGGGHVRAAGFSAKGNVHS
HHHCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
IVNKIGEMIEQQYNEDNA
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIIEEIGHAKVIGITGHIRPDGDCVGSTLGLYNYIRKNLPECEVTVYLEKPSDEFNYLS
CCHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
GINDIKHEAEDKHFDLFVVLDCSSMDRIEPFMSCFENADKTICIDHHISNNSFADVNYVE
CCHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEC
PQSSSACEVLYTTFDEDKVDKNVAECIYTGIIHDTGVFKYSCTSRRTMDIAGKMMEMGID
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCC
YSDIIDNSFYKKSYIQNQILGRALLESVLFYDGRCIFSSVSIEEMNFYGVTGKELGGIIE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEECCEEECCCHHHHHHHHH
QLRLTDGVEVAIFLYETDKDEYKVSLRSKKMIDVARIATAFGGGGHVRAAGFSAKGNVHS
HHHCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
IVNKIGEMIEQQYNEDNA
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]