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The map label for this gene is mrkA [H]

Identifier: 238896390

GI number: 238896390

Start: 4373168

End: 4373776

Strand: Reverse

Name: mrkA [H]

Synonym: KP1_4561

Alternate gene names: 238896390

Gene position: 4373776-4373168 (Counterclockwise)

Preceding gene: 238896393

Following gene: 238896389

Centisome position: 83.33

GC content: 53.53

Gene sequence:

>609_bases
ATGAAAAAGGTTCTTCTCTCTGCAGCAATGGCAACCGCGTTTTTTGGCATGACTGCTGCCCATGCAGCTGATACCAATGT
TGGCGGCGGCCAGGTTAATTTCTTCGGTAAAGTTACCGATGTATCCTGTACTGTTTCCGTTAACGGCCAGGGCAGCGATG
CGAACGTTTACCTGTCTCCGGTAACCCTGACTGAAGTTAAAGCGGCAGCAGCGGATACTTACCTGAAACCGAAATCTTTC
ACCATTGACGTCTCTAACTGCCAGGCTGCTGATGGCACTAAACAGGATGACGTAAGCAAACTGGGCGTGAACTGGACCGG
CGGTAACCTGCTGGCTGGCGCAACCAGCAAACAACAGGGCTACCTGGCGAACACTGAAGCTTCCGGTGCTCAGAACATCC
AGCTGGTGCTGTCTACTGACAACGCTACCGCGCTGACCAACAAAATCATCCCGGGTGACAGCACTCAGCCGAAAGCGAAA
GGCGACGCTTCCGCTGTAGCTGATGGCGCGCGTTTCACCTACTACGTAGGTTACGCCACCAGCGCGCCGACCACGGTAAC
CACCGGTGTGGTTAACAGCTACGCGACTTACGAAATTACTTACCAGTAA

Upstream 100 bases:

>100_bases
ATTAGCAGTGGCATAAATCAGCATCGCCTGATGTTTCTGGTTCTATGCGAATTCACAGTGTGCTCATTGATTCGTAATTC
ACTCTGACAAGGAAATGGCA

Downstream 100 bases:

>100_bases
TTCCGTCAGAAAATAAAACTGCCCCGCGATGGGGCAGTTAATAACAATAATAAAGCGGCAATGTCCGCCGCTTGTATTTT
TATTCTGAGGTCAGCATGAA

Product: type 3 fimbrial protein mrkA precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKKVLLSAAMATAFFGMTAAHAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSPVTLTEVKAAAADTYLKPKSF
TIDVSNCQAADGTKQDDVSKLGVNWTGGNLLAGATSKQQGYLANTEASGAQNIQLVLSTDNATALTNKIIPGDSTQPKAK
GDASAVADGARFTYYVGYATSAPTTVTTGVVNSYATYEITYQ

Sequences:

>Translated_202_residues
MKKVLLSAAMATAFFGMTAAHAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSPVTLTEVKAAAADTYLKPKSF
TIDVSNCQAADGTKQDDVSKLGVNWTGGNLLAGATSKQQGYLANTEASGAQNIQLVLSTDNATALTNKIIPGDSTQPKAK
GDASAVADGARFTYYVGYATSAPTTVTTGVVNSYATYEITYQ
>Mature_202_residues
MKKVLLSAAMATAFFGMTAAHAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSPVTLTEVKAAAADTYLKPKSF
TIDVSNCQAADGTKQDDVSKLGVNWTGGNLLAGATSKQQGYLANTEASGAQNIQLVLSTDNATALTNKIIPGDSTQPKAK
GDASAVADGARFTYYVGYATSAPTTVTTGVVNSYATYEITYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20749; Mature: 20749

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLSAAMATAFFGMTAAHAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEEC
VTLTEVKAAAADTYLKPKSFTIDVSNCQAADGTKQDDVSKLGVNWTGGNLLAGATSKQQG
EEHHHHHHHHHHCEECCCEEEEECCCCCCCCCCCCCCHHHCCCEECCCCEEECCCCCCCC
YLANTEASGAQNIQLVLSTDNATALTNKIIPGDSTQPKAKGDASAVADGARFTYYVGYAT
EEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEEEEEEC
SAPTTVTTGVVNSYATYEITYQ
CCCCEEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MKKVLLSAAMATAFFGMTAAHAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEEC
VTLTEVKAAAADTYLKPKSFTIDVSNCQAADGTKQDDVSKLGVNWTGGNLLAGATSKQQG
EEHHHHHHHHHHCEECCCEEEEECCCCCCCCCCCCCCHHHCCCEECCCCEEECCCCCCCC
YLANTEASGAQNIQLVLSTDNATALTNKIIPGDSTQPKAKGDASAVADGARFTYYVGYAT
EEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEEEEEEC
SAPTTVTTGVVNSYATYEITYQ
CCCCEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2900237; 1670938 [H]