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The map label for this gene is pecM [H]

Identifier: 238896393

GI number: 238896393

Start: 4374787

End: 4375683

Strand: Reverse

Name: pecM [H]

Synonym: KP1_4564

Alternate gene names: 238896393

Gene position: 4375683-4374787 (Counterclockwise)

Preceding gene: 238896395

Following gene: 238896390

Centisome position: 83.37

GC content: 64.99

Gene sequence:

>897_bases
ATGGCTTTTCTCTCACGTAATCTGATTCTCGACCTGCTGCTCACCGCGCTGGCGCCCGCTATCTGGGGGACGACCTACAT
CGTCACCTCCCAGTTTCTTCCCCCTGACCGCCCATTTATTGCTGCGCTGCTGCGGGTGCTGCCGGCAGGTATCGCCCTGC
TGATCTGGAGCCGTCGTTTTCCGCAGCGCGGCGAATGGGCAAAGCTGATCGTTACCGGCATCTTAAATATCGGCGCGTTT
CAGGCGCTGTTGTTTATCGCCGCCTATCGCTTACCCGGCGGGCTGGCGGCGGTGATCGGCGCGATCCAGCCGCTGCTGGT
GATGCTCCTCGCCTGGTGCGTCGACCGGCAGCGCTCGCCCTGGCTGGCCGTGTTATCCGCCATCGCCGGCATACTCGGTA
TGGCCATGCTGCTGCTGTCGCCGCACACCGTCCTCGACCCGCTGGGCATCGGCGCGGCGTTTCTCGGGGCGATCAGTATG
GCGCTGGGCACCTGGCTCTCCCGGCGCTGGGCGCTCTCCCTGCCGATCGTCGCGCTGACCGGCTGGCAGCTGACGATCGG
TGGGGTGGTGCTGGCCCCGGTGGCGCTGATCGTTGACCCTCCTTTGCATCAGGTAACAGTGCTGCAGGCGGCCGGCTATC
TGTGGCTGTGCCTGGCGGGCGCCATGCTGGCCTATGGCCTGTGGTTTCGGGGGATTGGCCGCCTCTCACCGGTGGCCGTG
TCGGCGATGAGTCTGCTGAGCCCGGTGACCGCCGTGGTACTGGGATGGATATTCCTCGGACAAAAGATCCAGGGGATGGC
GCTGATGGGATTGATCGTGGTGCTGGCGAGCGTGCTGTCTATCCAGCGCGCGCTGGCGCGTCAGGCGGCGGGAGCAAAAA
CGAAAAAAGCCCCGTAA

Upstream 100 bases:

>100_bases
TCGGCGGTGATTTGTCCATTAGTGCTCACTTGTCTTGATATCAAGATACTTGGCGGTACATACTTCACTCACTAATTTAC
CTTGAAGTGAAGATAAAATC

Downstream 100 bases:

>100_bases
CGGGGCTCGACATTGCTGCGTGCGGGGTGGGCGGCGGGAGCCAGACCAGCCACCCGCAGGCGGCCTGTCCGGCAGCTCCC
TCTGCAACCATTCGCTTATT

Product: putative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MAFLSRNLILDLLLTALAPAIWGTTYIVTSQFLPPDRPFIAALLRVLPAGIALLIWSRRFPQRGEWAKLIVTGILNIGAF
QALLFIAAYRLPGGLAAVIGAIQPLLVMLLAWCVDRQRSPWLAVLSAIAGILGMAMLLLSPHTVLDPLGIGAAFLGAISM
ALGTWLSRRWALSLPIVALTGWQLTIGGVVLAPVALIVDPPLHQVTVLQAAGYLWLCLAGAMLAYGLWFRGIGRLSPVAV
SAMSLLSPVTAVVLGWIFLGQKIQGMALMGLIVVLASVLSIQRALARQAAGAKTKKAP

Sequences:

>Translated_298_residues
MAFLSRNLILDLLLTALAPAIWGTTYIVTSQFLPPDRPFIAALLRVLPAGIALLIWSRRFPQRGEWAKLIVTGILNIGAF
QALLFIAAYRLPGGLAAVIGAIQPLLVMLLAWCVDRQRSPWLAVLSAIAGILGMAMLLLSPHTVLDPLGIGAAFLGAISM
ALGTWLSRRWALSLPIVALTGWQLTIGGVVLAPVALIVDPPLHQVTVLQAAGYLWLCLAGAMLAYGLWFRGIGRLSPVAV
SAMSLLSPVTAVVLGWIFLGQKIQGMALMGLIVVLASVLSIQRALARQAAGAKTKKAP
>Mature_297_residues
AFLSRNLILDLLLTALAPAIWGTTYIVTSQFLPPDRPFIAALLRVLPAGIALLIWSRRFPQRGEWAKLIVTGILNIGAFQ
ALLFIAAYRLPGGLAAVIGAIQPLLVMLLAWCVDRQRSPWLAVLSAIAGILGMAMLLLSPHTVLDPLGIGAAFLGAISMA
LGTWLSRRWALSLPIVALTGWQLTIGGVVLAPVALIVDPPLHQVTVLQAAGYLWLCLAGAMLAYGLWFRGIGRLSPVAVS
AMSLLSPVTAVVLGWIFLGQKIQGMALMGLIVVLASVLSIQRALARQAAGAKTKKAP

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31612; Mature: 31481

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLSRNLILDLLLTALAPAIWGTTYIVTSQFLPPDRPFIAALLRVLPAGIALLIWSRRF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PQRGEWAKLIVTGILNIGAFQALLFIAAYRLPGGLAAVIGAIQPLLVMLLAWCVDRQRSP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
WLAVLSAIAGILGMAMLLLSPHTVLDPLGIGAAFLGAISMALGTWLSRRWALSLPIVALT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEE
GWQLTIGGVVLAPVALIVDPPLHQVTVLQAAGYLWLCLAGAMLAYGLWFRGIGRLSPVAV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SAMSLLSPVTAVVLGWIFLGQKIQGMALMGLIVVLASVLSIQRALARQAAGAKTKKAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AFLSRNLILDLLLTALAPAIWGTTYIVTSQFLPPDRPFIAALLRVLPAGIALLIWSRRF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PQRGEWAKLIVTGILNIGAFQALLFIAAYRLPGGLAAVIGAIQPLLVMLLAWCVDRQRSP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
WLAVLSAIAGILGMAMLLLSPHTVLDPLGIGAAFLGAISMALGTWLSRRWALSLPIVALT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEE
GWQLTIGGVVLAPVALIVDPPLHQVTVLQAAGYLWLCLAGAMLAYGLWFRGIGRLSPVAV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SAMSLLSPVTAVVLGWIFLGQKIQGMALMGLIVVLASVLSIQRALARQAAGAKTKKAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]