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The map label for this gene is uhpA [C]

Identifier: 238896384

GI number: 238896384

Start: 4366759

End: 4367343

Strand: Direct

Name: uhpA [C]

Synonym: KP1_4552

Alternate gene names: 238896384

Gene position: 4366759-4367343 (Clockwise)

Preceding gene: 238896383

Following gene: 238896385

Centisome position: 83.2

GC content: 46.32

Gene sequence:

>585_bases
TTGGACAGTATATTGCTGTACACCAATGACAATCTCATTGGTCACTCAATCTATCACTACCTTATTGATAGCCATGAAAA
TGCCACCCGTCTGAGTTATGCCGATGTCATCCATGAGAAACATCTGCCACTGGCCCAGACGATTATTTTCAATTTAATTA
ATAAGGATATTTCTGCCATCAGAATCGTCGATCTGCTAAATGCGCTCCGCCTTTCCCTGCTGCGCTGCCAGCAGCCGGTG
CTAATGGTGAAAAGCGACATTGTCGGGCTGTGCAGAGAGTTGATAAACTTTGACAATGCTATGATTATTAGCGAGAAATC
TCCGCTAACTCTTTTTTCATCTATCGTCCAGCGCGCCAAAGGCGTCAGCGAACTGCCGCCGCGAGGATTGCGCAAACAGC
TTTCACCACGGGAGTGTCAGATCCTCGAACTGCTCATTGCCAACAATAATAATAAGCGTATTGCCGCCCTGCTCGGCATT
GCTCATAAAACGGTTCATAGCCACCGCATCCATATCATGCAAAAACTGGGTATTGATAATTCCCGCACTATGAATCAGCG
TATTGCCGCTCTCCATCAATGCTAA

Upstream 100 bases:

>100_bases
GCCAGTTTAAGTTCCGCCATCTCGATGACCAGCGCAGAATAGAGAAGATACTGCTGGACCTGATCTTAGAAGCCAAGCGC
AAAAAGAGAATCTGACAACC

Downstream 100 bases:

>100_bases
ATGTTCTCCCGGTAAATCAGTAGCGGATAAAGCGTACTTATTCGCTGTTGATTTACATTTCCCGCCATTCCCATTAATCA
TCAGGTAGCCTATAATTAAT

Product: putative LuxR family regulatory protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDSILLYTNDNLIGHSIYHYLIDSHENATRLSYADVIHEKHLPLAQTIIFNLINKDISAIRIVDLLNALRLSLLRCQQPV
LMVKSDIVGLCRELINFDNAMIISEKSPLTLFSSIVQRAKGVSELPPRGLRKQLSPRECQILELLIANNNNKRIAALLGI
AHKTVHSHRIHIMQKLGIDNSRTMNQRIAALHQC

Sequences:

>Translated_194_residues
MDSILLYTNDNLIGHSIYHYLIDSHENATRLSYADVIHEKHLPLAQTIIFNLINKDISAIRIVDLLNALRLSLLRCQQPV
LMVKSDIVGLCRELINFDNAMIISEKSPLTLFSSIVQRAKGVSELPPRGLRKQLSPRECQILELLIANNNNKRIAALLGI
AHKTVHSHRIHIMQKLGIDNSRTMNQRIAALHQC
>Mature_194_residues
MDSILLYTNDNLIGHSIYHYLIDSHENATRLSYADVIHEKHLPLAQTIIFNLINKDISAIRIVDLLNALRLSLLRCQQPV
LMVKSDIVGLCRELINFDNAMIISEKSPLTLFSSIVQRAKGVSELPPRGLRKQLSPRECQILELLIANNNNKRIAALLGI
AHKTVHSHRIHIMQKLGIDNSRTMNQRIAALHQC

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21979; Mature: 21979

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50043 HTH_LUXR_2 ; PS00527 RIBOSOMAL_S14

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSILLYTNDNLIGHSIYHYLIDSHENATRLSYADVIHEKHLPLAQTIIFNLINKDISAI
CCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
RIVDLLNALRLSLLRCQQPVLMVKSDIVGLCRELINFDNAMIISEKSPLTLFSSIVQRAK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
GVSELPPRGLRKQLSPRECQILELLIANNNNKRIAALLGIAHKTVHSHRIHIMQKLGIDN
CCCCCCCHHHHHCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRTMNQRIAALHQC
CHHHHHHHHHHHCC
>Mature Secondary Structure
MDSILLYTNDNLIGHSIYHYLIDSHENATRLSYADVIHEKHLPLAQTIIFNLINKDISAI
CCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
RIVDLLNALRLSLLRCQQPVLMVKSDIVGLCRELINFDNAMIISEKSPLTLFSSIVQRAK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
GVSELPPRGLRKQLSPRECQILELLIANNNNKRIAALLGIAHKTVHSHRIHIMQKLGIDN
CCCCCCCHHHHHCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRTMNQRIAALHQC
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA