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The map label for this gene is yhjH [H]

Identifier: 238896385

GI number: 238896385

Start: 4367487

End: 4368203

Strand: Direct

Name: yhjH [H]

Synonym: KP1_4554

Alternate gene names: 238896385

Gene position: 4367487-4368203 (Clockwise)

Preceding gene: 238896384

Following gene: 238896391

Centisome position: 83.21

GC content: 46.72

Gene sequence:

>717_bases
ATGAACACTAAAATATTCGAAGACAACATTTTATCTCGTAATGATATCGCTGTACGCTACGTCTTTCAGAAAATGTTTTC
CCCACAAGGTACTCTGGTCGCGGTGGAATGCTTAAGCCGCTTTGATAATCTTTCTATTTCCCCCGAAGATTTTTTCCGCC
ATGCTACCGCCGCCGTTCGTGAACGTATTTTTCTCGAACAACTGGCACTGATTGAAAAGCATAAAGCCTGGTTTTTACGT
AACCATATTTCCGCAACAATTAACGTTGATGACCATATCCTGAACCTGTTGCGCCAGAAGGATATAAAAGCCAAAATCGC
CGCCCTGACCTGCGTCCATTTCGAGGTAACCGAAAACGCCGAGAATCTGCTGCATAATTCTCTTGCCGCCTGGCAGAGCC
CACAGGATACCTCACTGTGGCTCGACGACTTCGGCTCCGGCTACGCGGGAATTAACGCTATTCGCGGTTATCACTTTGAC
TATGTGAAAATTGATAAGGATTTTTTCTGGCACCTGATGCGCAAAGAGTCCGGCCGCCAGCTGATGGATGCGCTGGTGAC
CTTTTTATCGCGCAACCATCATAATGTGATTATTGAAGGTGTCGAAAGCGAAGCCCATAAAGAATGGCTGCAGGGAATGG
AGTGGTTTGCTATCCAGGGACATTACTGGCGGGAAGTCAGTATTGAACAACTGGTCGCCGATGATATTGCCATGTAA

Upstream 100 bases:

>100_bases
GCTGTTGATTTACATTTCCCGCCATTCCCATTAATCATCAGGTAGCCTATAATTAATGTATCCTCTGCCTATTGTCTGAC
TAACCTCGTGAAGAGGGATA

Downstream 100 bases:

>100_bases
ACAAAGCCGGGAATTCCCGGCTTTTTAACGTCACTTAATTATAAACTAATTCCCACGTTGCCCAGCTGGTAATCGGCCCG
CTGGTGGCGCTTTTCGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNTKIFEDNILSRNDIAVRYVFQKMFSPQGTLVAVECLSRFDNLSISPEDFFRHATAAVRERIFLEQLALIEKHKAWFLR
NHISATINVDDHILNLLRQKDIKAKIAALTCVHFEVTENAENLLHNSLAAWQSPQDTSLWLDDFGSGYAGINAIRGYHFD
YVKIDKDFFWHLMRKESGRQLMDALVTFLSRNHHNVIIEGVESEAHKEWLQGMEWFAIQGHYWREVSIEQLVADDIAM

Sequences:

>Translated_238_residues
MNTKIFEDNILSRNDIAVRYVFQKMFSPQGTLVAVECLSRFDNLSISPEDFFRHATAAVRERIFLEQLALIEKHKAWFLR
NHISATINVDDHILNLLRQKDIKAKIAALTCVHFEVTENAENLLHNSLAAWQSPQDTSLWLDDFGSGYAGINAIRGYHFD
YVKIDKDFFWHLMRKESGRQLMDALVTFLSRNHHNVIIEGVESEAHKEWLQGMEWFAIQGHYWREVSIEQLVADDIAM
>Mature_238_residues
MNTKIFEDNILSRNDIAVRYVFQKMFSPQGTLVAVECLSRFDNLSISPEDFFRHATAAVRERIFLEQLALIEKHKAWFLR
NHISATINVDDHILNLLRQKDIKAKIAALTCVHFEVTENAENLLHNSLAAWQSPQDTSLWLDDFGSGYAGINAIRGYHFD
YVKIDKDFFWHLMRKESGRQLMDALVTFLSRNHHNVIIEGVESEAHKEWLQGMEWFAIQGHYWREVSIEQLVADDIAM

Specific function: A bis-(3'-5') cyclic diguanylic acid (c-di-GMP) phosphodiesterase involved in regulating the levels of c-di-GMP that control cell motility (the flagella) and adhesion (adhesive curli fimbriae). The YhjH effect on flagella is controlled via the c-di-GMP-bi

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87082280, Length=228, Percent_Identity=30.2631578947368, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 27692; Mature: 27692

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKIFEDNILSRNDIAVRYVFQKMFSPQGTLVAVECLSRFDNLSISPEDFFRHATAAVR
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ERIFLEQLALIEKHKAWFLRNHISATINVDDHILNLLRQKDIKAKIAALTCVHFEVTENA
HHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEEEEECCCH
ENLLHNSLAAWQSPQDTSLWLDDFGSGYAGINAIRGYHFDYVKIDKDFFWHLMRKESGRQ
HHHHHHHHHHCCCCCCCEEEHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
LMDALVTFLSRNHHNVIIEGVESEAHKEWLQGMEWFAIQGHYWREVSIEQLVADDIAM
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTKIFEDNILSRNDIAVRYVFQKMFSPQGTLVAVECLSRFDNLSISPEDFFRHATAAVR
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ERIFLEQLALIEKHKAWFLRNHISATINVDDHILNLLRQKDIKAKIAALTCVHFEVTENA
HHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEEEEECCCH
ENLLHNSLAAWQSPQDTSLWLDDFGSGYAGINAIRGYHFDYVKIDKDFFWHLMRKESGRQ
HHHHHHHHHHCCCCCCCEEEHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
LMDALVTFLSRNHHNVIIEGVESEAHKEWLQGMEWFAIQGHYWREVSIEQLVADDIAM
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]