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The map label for this gene is yphA [H]

Identifier: 238896001

GI number: 238896001

Start: 3960398

End: 3960922

Strand: Direct

Name: yphA [H]

Synonym: KP1_4129

Alternate gene names: 238896001

Gene position: 3960398-3960922 (Clockwise)

Preceding gene: 238896000

Following gene: 238896003

Centisome position: 75.46

GC content: 54.48

Gene sequence:

>525_bases
TTGAGGAGCAATTGCAGACGCTGGTTTAGTCATAAACGAACGTGGCGGAGCGCAAATTTGTGTATTACGTTTAAATCACA
CGTCTCTCATAACGAGCTGATTATGAACACACTCCGCTATTTTGATTTTGGCGCTTCCCGCTCTCTGTTGCTGCTTATCG
CCCGCATCGCCGTGGTGATTCTGTTTATTCTTTTTGGCTACCCCAAACTGCTGGGCTTTGACGGTACGGTGCAGTACATG
GCCGCCTCCGGCGCGCCGATGCCGACCCTGGCGGCGATTATCGCCGTCATTATGGAAGTGCCTGCCGCGATTCTGATTGT
GCTCGGCTTTTTCACCCGCCCGCTGGCGGTCATCTTTATTTTCTACACTCTGGGCACGGCGGTGATTGGCCATCACTACT
GGGATATGACTGGCGATGCGGTATTGCCGAACATGATTAACTTCTGGAAAAACGTCAGCATCGCCGGCGCTTTCCTGCTG
CTGGCCGTAACCGGCCCCGGGGCGATCTCCCTCGACCGCCGCTAA

Upstream 100 bases:

>100_bases
CCCTTTGACCACAGGGATACGCCGCGAGCGCACGCCACCCAAATTGGCTTTGGCCAGCTGACGCGCGCCCAGCAGCTGAT
GGGGATAGGTTATCTGTACG

Downstream 100 bases:

>100_bases
TCTCCAGACGCAAAAAAGGCCGCATACGCGGCCTTTTTGATGTCAACGCTAACGCTTACGCATATACCGGGAAGCGGGCG
CAGATATCCAGCACTTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRSNCRRWFSHKRTWRSANLCITFKSHVSHNELIMNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYM
AASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRPLAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLL
LAVTGPGAISLDRR

Sequences:

>Translated_174_residues
MRSNCRRWFSHKRTWRSANLCITFKSHVSHNELIMNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYM
AASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRPLAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLL
LAVTGPGAISLDRR
>Mature_174_residues
MRSNCRRWFSHKRTWRSANLCITFKSHVSHNELIMNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYM
AASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRPLAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLL
LAVTGPGAISLDRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=140, Percent_Identity=88.5714285714286, Blast_Score=254, Evalue=2e-69,
Organism=Escherichia coli, GI87082210, Length=123, Percent_Identity=43.0894308943089, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 19380; Mature: 19380

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSNCRRWFSHKRTWRSANLCITFKSHVSHNELIMNTLRYFDFGASRSLLLLIARIAVVI
CCCHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LFILFGYPKLLGFDGTVQYMAASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRPLAVIFI
HHHHHCCHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLLLAVTGPGAISLDRR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCEECCCC
>Mature Secondary Structure
MRSNCRRWFSHKRTWRSANLCITFKSHVSHNELIMNTLRYFDFGASRSLLLLIARIAVVI
CCCHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LFILFGYPKLLGFDGTVQYMAASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRPLAVIFI
HHHHHCCHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLLLAVTGPGAISLDRR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]