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The map label for this gene is perM [H]

Identifier: 238895941

GI number: 238895941

Start: 3889701

End: 3890762

Strand: Reverse

Name: perM [H]

Synonym: KP1_4066

Alternate gene names: 238895941

Gene position: 3890762-3889701 (Counterclockwise)

Preceding gene: 238895946

Following gene: 238895938

Centisome position: 74.13

GC content: 58.47

Gene sequence:

>1062_bases
ATGCTTGAGATGTTAATGCAGTGGTACCGCCGTCGATTCAGCGACCCTGAGGCGATAGCGCTGCTGGTTATTTTGCTTGC
CGGTTTCGGCATTATGTTCTTTTTCAGCGGCCTGCTGGCCCCGTTGCTGGTGGCTATCGTGCTGGCCTATCTGCTGGAGT
GGCCGACCGTTCGTCTGGAGCGCATCGGTCTGTCGCGCACCTGGGCCACCTCGCTGGTGCTGATCCTCTTTGTGGGCATC
CTGCTGTTGCTGGCCTTTGTGGTGCTGCCGGTAGCCTGGCAGCAAGGGATCTACCTCATCCGCGATATGCCGGGCATGCT
AAATAAGCTCTCTGATTTCGCCGCCACGCTGCCGCGGCGCTATCCGGCGTTAATGGATGCCGGCATTATCGATGCGATGG
CGGAAAATATGCGCACCCGGATGCTGACGGTGGGCGACTCGGTGGTTAAGTACTCTCTGGCCTCGCTGGTGGGGTTACTC
ACCCTGGCGGTCTATCTGGTGCTGGTGCCGCTGATGGTCTTCTTCCTGCTGAAGGATAAAGAGCAGATGCTCAACGCGGT
GCGCCGCGTTCTGCCGCGCAATCGCGGGCTTGCCGGGCAGGTGTGGAAAGAGATGAACCAGCAGATCACCAACTACATTC
GCGGCAAGGTGCTGGAGATGATTGTCGTCAGCGTCGCCACCTGGATAGGCTTTATTCTCTTTGGCCTCAACTATTCGCTG
CTGCTGGCGGTGCTGGTGGGCTTCTCGGTGCTGATCCCCTATATCGGCGCGTTTGTGGTGACCATTCCGGTGGTGGGGGT
GGCGCTGTTTCAGTTTGGCGCTGGCACCGAGTTCTGGAGCCTGTTTGCGGTCTATCTGATTATTCAGGGGCTGGACGGTA
ACCTGCTGGTTCCGGTGCTGTTCTCGGAAGCGGTCAATTTACACCCGCTGGTGATTATCCTGTCGGTGGTGATCTTTGGC
GGACTGTGGGGATTCTGGGGCGTCTTCTTCGCCATTCCTCTGGCCACGCTGATTAAAGCAGTGGTGCATGCCTGGCCGGA
TGGTTTGGCGGTCGACGACTAA

Upstream 100 bases:

>100_bases
GAACGGTTTGACTGCGGCGCATCAAAAAGCGAAGTCTTTTTTGTGACATTTCGATACAATTCCCCGGATTGTCGCCGCTT
GGCCCTTCAGGGAAGGTTTT

Downstream 100 bases:

>100_bases
GGCAATGAGAATAAAAAAGACGCCGGGCGAGGGCTTCCTCTCCCGGCGTCTTGCTTTGCATCAGGCGTTTTCTTTCAGCC
AGTTCAGCACCACGTCGTGG

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLEMLMQWYRRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLERIGLSRTWATSLVLILFVGI
LLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLTVGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVVHAWPDGLAVDD

Sequences:

>Translated_353_residues
MLEMLMQWYRRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLERIGLSRTWATSLVLILFVGI
LLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLTVGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVVHAWPDGLAVDD
>Mature_353_residues
MLEMLMQWYRRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLERIGLSRTWATSLVLILFVGI
LLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLTVGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVVHAWPDGLAVDD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=348, Percent_Identity=93.6781609195402, Blast_Score=647, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39222; Mature: 39222

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEMLMQWYRRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RIGLSRTWATSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YPALMDAGIIDAMAENMRTRMLTVGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYSL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGLAVDD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLEMLMQWYRRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RIGLSRTWATSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YPALMDAGIIDAMAENMRTRMLTVGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLLKDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYSL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGLAVDD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]