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The map label for this gene is yfbB [H]

Identifier: 238895788

GI number: 238895788

Start: 3733099

End: 3733857

Strand: Reverse

Name: yfbB [H]

Synonym: KP1_3902

Alternate gene names: 238895788

Gene position: 3733857-3733099 (Counterclockwise)

Preceding gene: 238895789

Following gene: 238895787

Centisome position: 71.14

GC content: 63.9

Gene sequence:

>759_bases
GTGATCCTCAGCGCTGCTGTCGACAACGGCCAGCCGGGCTATCCCTGGCTGGTGTTTCTGCACGGTTTTTCCGGCGACCG
CAACGAGTGGCGGAAAGTGGGCGACGCCTTTCCCGCCTGGCCGCGGCTGTACCTCGATCTGCCGGGGCACGGCGGCTCCG
CGGATATCGCGGTGCAGGACTTTGCCGGGGTCAATACTCTGCTGCAGTCTATGTTTAATAGTTACAACATACATAAGTAT
TGGCTGATCGGCTACTCGCTGGGCGGCCGGGTGGCAATGAACTTCGCCAGCCAGCCGCGCGCAGGCATGCGCGGGCTGAT
CGTTGAAGGCGGCCATCCGGGCCTGCAGGATGTAGAGGCGCGGCAGGCGCGGCGCAGCAATGACAGCGCCTGGGCGGAAC
GTTTTCGCCGCGAGCCGCTTGAGCAGGTCTTTGCCGACTGGTATCAGCAGCCGGTCTTCGCTTCGCTGAATGCCGCGCAG
CGTGAGTCATTGGTCGCCTTACGCAGCCGGAACAACGGCGCGACGCTGGCGGCGATGCTGCAGGCAACCTCCCTTGCCGC
GCAGGCCGATCTGCACGCGTCTCTGCAGGCACGCGATTTTCCTTTTCACTACCTGTGCGGCGAGCGCGACGCGAAGTTTC
GCGCCATCGCGCAGACGCTCGCGGCGGATCTCCATCTTATTCACCATGCCGGACACAACGCGCACCGGGACAACCCGGCG
GCGGTGATTGCCTGTCTGGCGCAGATTCTGGCAAGTTAA

Upstream 100 bases:

>100_bases
GCGCCTGGCGCAGGGCAGGGGCGACGGTGATTGAGCTGGCGGTCAATGAGACCGACGGCGCGCAGACCCTCCAGCAGCTG
CTGGCGCAGGTAAGTCGCCT

Downstream 100 bases:

>100_bases
CTGAAGGACATTCTATGATCTCTCTTGATGAAGCAATGCTCTACGCCCCCGTTGAATGGCACGATTGCTCCGAAGGCTAT
ACCGATATTCGCTATCACAA

Product: acyl-CoA thioester hydrolase YfbB

Products: NA

Alternate protein names: SHCHC synthase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MILSAAVDNGQPGYPWLVFLHGFSGDRNEWRKVGDAFPAWPRLYLDLPGHGGSADIAVQDFAGVNTLLQSMFNSYNIHKY
WLIGYSLGGRVAMNFASQPRAGMRGLIVEGGHPGLQDVEARQARRSNDSAWAERFRREPLEQVFADWYQQPVFASLNAAQ
RESLVALRSRNNGATLAAMLQATSLAAQADLHASLQARDFPFHYLCGERDAKFRAIAQTLAADLHLIHHAGHNAHRDNPA
AVIACLAQILAS

Sequences:

>Translated_252_residues
MILSAAVDNGQPGYPWLVFLHGFSGDRNEWRKVGDAFPAWPRLYLDLPGHGGSADIAVQDFAGVNTLLQSMFNSYNIHKY
WLIGYSLGGRVAMNFASQPRAGMRGLIVEGGHPGLQDVEARQARRSNDSAWAERFRREPLEQVFADWYQQPVFASLNAAQ
RESLVALRSRNNGATLAAMLQATSLAAQADLHASLQARDFPFHYLCGERDAKFRAIAQTLAADLHLIHHAGHNAHRDNPA
AVIACLAQILAS
>Mature_252_residues
MILSAAVDNGQPGYPWLVFLHGFSGDRNEWRKVGDAFPAWPRLYLDLPGHGGSADIAVQDFAGVNTLLQSMFNSYNIHKY
WLIGYSLGGRVAMNFASQPRAGMRGLIVEGGHPGLQDVEARQARRSNDSAWAERFRREPLEQVFADWYQQPVFASLNAAQ
RESLVALRSRNNGATLAAMLQATSLAAQADLHASLQARDFPFHYLCGERDAKFRAIAQTLAADLHLIHHAGHNAHRDNPA
AVIACLAQILAS

Specific function: Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). Is also

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. MenH family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=250, Percent_Identity=66.8, Blast_Score=335, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =4.2.99.20 [H]

Molecular weight: Translated: 27729; Mature: 27729

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSAAVDNGQPGYPWLVFLHGFSGDRNEWRKVGDAFPAWPRLYLDLPGHGGSADIAVQD
CEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHH
FAGVNTLLQSMFNSYNIHKYWLIGYSLGGRVAMNFASQPRAGMRGLIVEGGHPGLQDVEA
HHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHH
RQARRSNDSAWAERFRREPLEQVFADWYQQPVFASLNAAQRESLVALRSRNNGATLAAML
HHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCCHHHHHHH
QATSLAAQADLHASLQARDFPFHYLCGERDAKFRAIAQTLAADLHLIHHAGHNAHRDNPA
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AVIACLAQILAS
HHHHHHHHHHCC
>Mature Secondary Structure
MILSAAVDNGQPGYPWLVFLHGFSGDRNEWRKVGDAFPAWPRLYLDLPGHGGSADIAVQD
CEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHH
FAGVNTLLQSMFNSYNIHKYWLIGYSLGGRVAMNFASQPRAGMRGLIVEGGHPGLQDVEA
HHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHH
RQARRSNDSAWAERFRREPLEQVFADWYQQPVFASLNAAQRESLVALRSRNNGATLAAML
HHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHCCCCCHHHHHHH
QATSLAAQADLHASLQARDFPFHYLCGERDAKFRAIAQTLAADLHLIHHAGHNAHRDNPA
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AVIACLAQILAS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA