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The map label for this gene is yeaB [H]

Identifier: 238895388

GI number: 238895388

Start: 3274091

End: 3274669

Strand: Direct

Name: yeaB [H]

Synonym: KP1_3454

Alternate gene names: 238895388

Gene position: 3274091-3274669 (Clockwise)

Preceding gene: 238895387

Following gene: 238895389

Centisome position: 62.38

GC content: 65.63

Gene sequence:

>579_bases
ATGGCGGATCGCGCCCTTAATCTGGATGATTTTCTGTCCCGCTTTCAGCTTCTGCGCCCGCAGCCTTCGCGCCATGCGCT
CAATCAGCGGCAGGCGGCGGTACTGGTGCCGATCGTGCGCCGGCCGCAGCCCGGCCTGCTGCTGACCCAGCGTTCGCCGC
TGCTGCGCAAGCACGCCGGCCAGGTCGCCTTTCCCGGCGGCGCAGTAGATAATACCGACGCGACGCTTATCGCCGCCGCC
CTGCGCGAAGCTCAGGAAGAGGTGGCGATCCCGCCGGAGGCGGTCGAGGTGATCGGCGTCCTGCCGCCGGTGGACAGCGT
CACCGGCTTTCAGGTGACGCCGGTGGTGGGCATTATTCCCCCGGATCTGCACTACCACGCCAGCCAGGACGAAGTCTCCG
CGGTATTTGAAATGCCGCTCGCCGAAGCCCTGCGCCTTGGGCGCTACCATCCACTCGATATCCACCGCCGGGGCAACGAC
CACCGCGTCTGGCTCTCCTGGTACCAGCATTATTTTGTCTGGGGAATGACCGCCGGGATCATTCGCGAGCTGGCGCTGCA
AATTGGCGCACGTCCTTAG

Upstream 100 bases:

>100_bases
CGCCGGCGGCGGAATTGTGGCGGATAGCGAGGAAGCGGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGC
AGCAACTGGAGAACTAGACC

Downstream 100 bases:

>100_bases
CTATACTGATAATGAGAGGGCGCTCTCATTATTAGTAAAATCGCGGTTAGCCATTAGTTTAATTCATGTGAATAGTTGAA
CTGACAGGGCGCTTCCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MADRALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAGQVAFPGGAVDNTDATLIAAA
LREAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIPPDLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGND
HRVWLSWYQHYFVWGMTAGIIRELALQIGARP

Sequences:

>Translated_192_residues
MADRALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAGQVAFPGGAVDNTDATLIAAA
LREAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIPPDLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGND
HRVWLSWYQHYFVWGMTAGIIRELALQIGARP
>Mature_191_residues
ADRALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAGQVAFPGGAVDNTDATLIAAAL
REAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIPPDLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGNDH
RVWLSWYQHYFVWGMTAGIIRELALQIGARP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=186, Percent_Identity=34.9462365591398, Blast_Score=81, Evalue=7e-16,
Organism=Escherichia coli, GI1788115, Length=192, Percent_Identity=84.375, Blast_Score=301, Evalue=2e-83,
Organism=Caenorhabditis elegans, GI17536993, Length=118, Percent_Identity=39.8305084745763, Blast_Score=73, Evalue=9e-14,
Organism=Drosophila melanogaster, GI18859683, Length=173, Percent_Identity=31.2138728323699, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21328; Mature: 21197

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAG
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEHHHCCCCCCEEEECCCHHHHHHCC
QVAFPGGAVDNTDATLIAAALREAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIP
CEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEECCEEEECC
PDLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGNDHRVWLSWYQHYFVWGMTAGI
CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGARP
HHHHHHHHCCCC
>Mature Secondary Structure 
ADRALNLDDFLSRFQLLRPQPSRHALNQRQAAVLVPIVRRPQPGLLLTQRSPLLRKHAG
CCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEHHHCCCCCCEEEECCCHHHHHHCC
QVAFPGGAVDNTDATLIAAALREAQEEVAIPPEAVEVIGVLPPVDSVTGFQVTPVVGIIP
CEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEECCEEEECC
PDLHYHASQDEVSAVFEMPLAEALRLGRYHPLDIHRRGNDHRVWLSWYQHYFVWGMTAGI
CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGARP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA