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The map label for this gene is ychP [H]

Identifier: 238895278

GI number: 238895278

Start: 3159096

End: 3160478

Strand: Reverse

Name: ychP [H]

Synonym: KP1_3330

Alternate gene names: 238895278

Gene position: 3160478-3159096 (Counterclockwise)

Preceding gene: 238895279

Following gene: 238895275

Centisome position: 60.22

GC content: 61.03

Gene sequence:

>1383_bases
ATGCCTGTGTCGTTCCGTTTGTTGCCAACGTTGACCTTTCTCCTGCTGTTGCCGGGCGTTCCCGTCTGGGCGCTGACCGC
CAGCGACACCACCCGCCCTGCGCAAGCGCAAGATCCGCTGCCCGATATGGGGATTGCTCCCCAGGTTGATGACGACGCCC
GGCACTTTGCCGAAGTGGCGAAGAAGTTTGGCGAGGCCAGCATGAGCGACAATGGTCTGACGGCGGGTGAACAGGCGCAG
CTGTTTGCCATCAGTAAAATCGGCAATGAAGTGAGTCATCAGCTGGAGAGTTGGCTCTCGCCGTGGGGCAACGCCAATGT
CGACCTGCTGGTCGATAAAGAGGGGAAATTCACCGGCAGTAAAGGGAGCTGGTTCGTGCCGTTGCAGGATAACGACCGTT
ACCTGACCTGGAACCAGTACTCGGTGACCCGGCGCGAGCACGATCTGGTGGGCAACATCGGGCTTGGCCAGCGTTGGCGG
GTCGGCGGTTGGCTGCTGGGCTATAACTCGTTTTACGATAAAGTGCTGAGCGAAAGCCTGGCGCGCGGCAGCGTTGGCGC
CGAAGCGTGGGGAGAATATCTCCGCCTGTCGGCAAACTATTACCATCCGCTGGGCGACTGGCAGCTACGCGATAATCAGA
CTCAGGAGCAACGGATGGCCGCAGGGTATGACGTCACCGCCCAGGCGCGGCTGCCGTTCTACCAGCACATCAACACCAGC
GTCAGCGTCGAACAGTATTTCGGCGATAGCGTCGATCTGTTTCACTCCGGCACCGGCTACCATAATCCGGTGGCCGTCTC
CGTTGGGCTCAATTACACCCCGGTCCCGCTGGTCACGGTGACCGCTAAGCATAAGCAGGGGGAAAATGGCGTCAGCCAGA
ACAATGTGGGCCTGAAGCTAAACTACCGCTTTGGCGTACCCCTTAAGCAGCAGCTTGCGGCAGACGAGGTGGCGATCAGC
AACTCGCTGCGCGGGAGCCGCTTCGATAGTCCGGAGCGGGATAATCTGCCGGTGGTGGAGTATCGTCAGCGCAAAAATCT
GACGGTCTATCTGGCCACGCCGCCCTGGGATCTGCAGTCCGGGGAGACGGTGCAGTTGAAGCTGCAGATCCATAGTCTGC
ATGGCATCAAGGCGCTGCACTGGCAGGGAGACACCCAGGCCCTCAGCCTGACGCCGCCGGTAGATGCCAGCAGCCCCGAT
GGCTGGAGCATCATTATGCCGGTGTGGAACAGTGAACCGGGCGCCGCGAACCGCTGGCGCCTGTCGGTGGTGGTGGAGGA
TAAACAGGGGCAGCGCGTCTCCTCCAATGAGATCGCCCTGGCGTTGACCGAGCCGCTGGTCAAGTTTACCACGCCAGGCG
TCTCCTGGACGGACTCGCCTTAG

Upstream 100 bases:

>100_bases
TCAGCTTATTCCTGGAATTGCCCACAGGGCTGCGGGAGCAGGGAAAAAACGATAAACTAACACTTCTATCCATTTTTCTG
AGCTTGCGCAAACTCTGTTA

Downstream 100 bases:

>100_bases
AAGATTCGCTCCTGGTGGACCCATACCGCCGCTTCCACGCGGGATTTGAGCTTCATTTTCTTCAGCATGTGCTTCACGTG
TACTTTGACGGTGCTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MPVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVAKKFGEASMSDNGLTAGEQAQ
LFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGSKGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWR
VGGWLLGYNSFYDKVLSESLARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTS
VSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKLNYRFGVPLKQQLAADEVAIS
NSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQSGETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPD
GWSIIMPVWNSEPGAANRWRLSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP

Sequences:

>Translated_460_residues
MPVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVAKKFGEASMSDNGLTAGEQAQ
LFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGSKGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWR
VGGWLLGYNSFYDKVLSESLARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTS
VSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKLNYRFGVPLKQQLAADEVAIS
NSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQSGETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPD
GWSIIMPVWNSEPGAANRWRLSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP
>Mature_459_residues
PVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVAKKFGEASMSDNGLTAGEQAQL
FAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGSKGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWRV
GGWLLGYNSFYDKVLSESLARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTSV
SVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKLNYRFGVPLKQQLAADEVAISN
SLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQSGETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPDG
WSIIMPVWNSEPGAANRWRLSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=462, Percent_Identity=62.3376623376623, Blast_Score=571, Evalue=1e-164,
Organism=Escherichia coli, GI145693153, Length=359, Percent_Identity=32.5905292479109, Blast_Score=169, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50954; Mature: 50822

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVA
CCCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KKFGEASMSDNGLTAGEQAQLFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGS
HHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECC
KGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWRVGGWLLGYNSFYDKVLSESL
CCCEEEEEECCCCEEEECCEEECCCCHHCEECCCCCCEEECCCEEECHHHHHHHHHHHHH
ARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTS
HCCCCCHHHHHHHEEEECCEECCCCCCEECCCCCHHHHHHCCCCEEEEECCCHHHHCCCC
VSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKL
EEHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE
NYRFGVPLKQQLAADEVAISNSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQS
EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCC
GETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPDGWSIIMPVWNSEPGAANRWR
CCEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEE
LSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP
EEEEEECCCCCEECCCCEEEEEECCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVA
CCEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KKFGEASMSDNGLTAGEQAQLFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGS
HHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECC
KGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWRVGGWLLGYNSFYDKVLSESL
CCCEEEEEECCCCEEEECCEEECCCCHHCEECCCCCCEEECCCEEECHHHHHHHHHHHHH
ARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTS
HCCCCCHHHHHHHEEEECCEECCCCCCEECCCCCHHHHHHCCCCEEEEECCCHHHHCCCC
VSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKL
EEHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE
NYRFGVPLKQQLAADEVAISNSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQS
EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCC
GETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPDGWSIIMPVWNSEPGAANRWR
CCEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEE
LSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP
EEEEEECCCCCEECCCCEEEEEECCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]