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The map label for this gene is ybhR [H]

Identifier: 238893842

GI number: 238893842

Start: 1712586

End: 1713692

Strand: Reverse

Name: ybhR [H]

Synonym: KP1_1774

Alternate gene names: 238893842

Gene position: 1713692-1712586 (Counterclockwise)

Preceding gene: 238893843

Following gene: 238893840

Centisome position: 32.65

GC content: 57.0

Gene sequence:

>1107_bases
ATGTTTCACCGTTTATGGACATTAATCCGCAAAGAGCTGCAGTCGCTGCTGCGCGAGCCGCAGACGCGGGCGATTTTAAT
CATGCCGGTGCTGATTCAGGTGCTGCTGTTTCCCTTTGCCGCGACGCTGGAGGTGACCAACGCCACCATCGCCATCTACA
ACGAGGACAGCGGTCGCCACGCGGTGGAACTCACTCAGCGCTTTGCCCGCGCCAAAGCCTTTACCCACGTCCTGCTGCTG
CAAAGCCCGCAGGCGATCCAGCCGACCATCGATGAACAAAAAGCTCTGCTGGTGGTGCGCTTCCCGGCCGATTTCTCGCG
CAATCTGGATAACTATCAAACCGCCCCGCTGCAGCTTCTGCTCGACGGACGCAACTCCAACAGCGCGCAAATCGCCGCCA
ACTATCTGCAACAGATTGTGAAAAACTATCAGCAGGAGCTGCTGGAGGGTAAAGCGAAGCCGAACAACAGCGAGCTGGTG
GTGCGCAACTGGTACAACCCGAATCTCGACTATAAATGGTTCGTGGTGCCATCGCTTATCGCCATGATCACTACCATCGG
GGTGATGATCGTCACCTCGCTGTCGGTGGCTCGCGAGCGCGAGCAGGGCACCCTTGACCAGCTGCTGGTCTCCCCCCTCG
CCACCTGGCAAATTTTCGTTGGCAAGGCGGTGCCGGCGCTGATCGTCGCCACCCTGCAGGCAACTATCGTGCTGGCGATT
GGTATCTGGGCCTATCAGATCCCGTTTGCCGGCTCGCTGCTGCTGTTCTATTTCACCATGGTGATTTACGGTCTATCGCT
GGTGGGCTTTGGCTTATTGATTTCGTCGCTGTGCGCCACCCAGCAGCAGGCGTTTATCGGCGTGTTCGTCTTTATGATGC
CGGCTATTCTCCTGTCGGGGTACGTCTCACCAGTGGAAAACATGCCGCAGTGGCTGCAGGATCTGACCTGGATAAATCCC
ATCCGCCACTTTACCGATATCACCAAGCAAATTTATCTGAAGGATGCGAGTCTGGAGATTGTGTGGGGAAGTTTGTGGCC
GCTACTGGTCATAGCGGCCACCACCGGCTCAGCGGCGTATGCGATGTTCCGAAGGAAGATTGCGTAA

Upstream 100 bases:

>100_bases
GCCTACGGTTTAACCAACATCGATTATACGGTTCGCCGATCCCGTAGGCCGGGCAAACGCAATGCCGCCCGGCGTGGTTG
AATGGGCCAAAGGAGCTATT

Downstream 100 bases:

>100_bases
TACCCGTCATCGTTCAAACTACAACGGCGTTGGCTTTCCTTACTCACCCCAGTCGCATAGTTATCTATGCTTCTGGGGAT
TCGCTGCGTTGCCGCCTTGT

Product: putative ABC-type transport system inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MFHRLWTLIRKELQSLLREPQTRAILIMPVLIQVLLFPFAATLEVTNATIAIYNEDSGRHAVELTQRFARAKAFTHVLLL
QSPQAIQPTIDEQKALLVVRFPADFSRNLDNYQTAPLQLLLDGRNSNSAQIAANYLQQIVKNYQQELLEGKAKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATLQATIVLAI
GIWAYQIPFAGSLLLFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSGYVSPVENMPQWLQDLTWINP
IRHFTDITKQIYLKDASLEIVWGSLWPLLVIAATTGSAAYAMFRRKIA

Sequences:

>Translated_368_residues
MFHRLWTLIRKELQSLLREPQTRAILIMPVLIQVLLFPFAATLEVTNATIAIYNEDSGRHAVELTQRFARAKAFTHVLLL
QSPQAIQPTIDEQKALLVVRFPADFSRNLDNYQTAPLQLLLDGRNSNSAQIAANYLQQIVKNYQQELLEGKAKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATLQATIVLAI
GIWAYQIPFAGSLLLFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSGYVSPVENMPQWLQDLTWINP
IRHFTDITKQIYLKDASLEIVWGSLWPLLVIAATTGSAAYAMFRRKIA
>Mature_368_residues
MFHRLWTLIRKELQSLLREPQTRAILIMPVLIQVLLFPFAATLEVTNATIAIYNEDSGRHAVELTQRFARAKAFTHVLLL
QSPQAIQPTIDEQKALLVVRFPADFSRNLDNYQTAPLQLLLDGRNSNSAQIAANYLQQIVKNYQQELLEGKAKPNNSELV
VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATLQATIVLAI
GIWAYQIPFAGSLLLFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSGYVSPVENMPQWLQDLTWINP
IRHFTDITKQIYLKDASLEIVWGSLWPLLVIAATTGSAAYAMFRRKIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=92.3705722070845, Blast_Score=696, Evalue=0.0,
Organism=Escherichia coli, GI1787011, Length=335, Percent_Identity=25.3731343283582, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI48994943, Length=357, Percent_Identity=22.96918767507, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI226510979, Length=374, Percent_Identity=24.5989304812834, Blast_Score=110, Evalue=1e-25,
Organism=Drosophila melanogaster, GI85725260, Length=367, Percent_Identity=22.6158038147139, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI85725262, Length=367, Percent_Identity=22.6158038147139, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41384; Mature: 41384

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHRLWTLIRKELQSLLREPQTRAILIMPVLIQVLLFPFAATLEVTNATIAIYNEDSGRH
CHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCH
AVELTQRFARAKAFTHVLLLQSPQAIQPTIDEQKALLVVRFPADFSRNLDNYQTAPLQLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCEEEE
LDGRNSNSAQIAANYLQQIVKNYQQELLEGKAKPNNSELVVRNWYNPNLDYKWFVVPSLI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATLQATIVLAI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWAYQIPFAGSLLLFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPQWLQDLTWINPIRHFTDITKQIYLKDASLEIVWGSLWPLLVIAATTGSAAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHHHCCCCHHHH
AMFRRKIA
HHHHHHCC
>Mature Secondary Structure
MFHRLWTLIRKELQSLLREPQTRAILIMPVLIQVLLFPFAATLEVTNATIAIYNEDSGRH
CHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCH
AVELTQRFARAKAFTHVLLLQSPQAIQPTIDEQKALLVVRFPADFSRNLDNYQTAPLQLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCEEEE
LDGRNSNSAQIAANYLQQIVKNYQQELLEGKAKPNNSELVVRNWYNPNLDYKWFVVPSLI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATLQATIVLAI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWAYQIPFAGSLLLFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPQWLQDLTWINPIRHFTDITKQIYLKDASLEIVWGSLWPLLVIAATTGSAAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHHHCCCCHHHH
AMFRRKIA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]