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The map label for this gene is ybhP [H]

Identifier: 238893840

GI number: 238893840

Start: 1711195

End: 1711956

Strand: Reverse

Name: ybhP [H]

Synonym: KP1_1772

Alternate gene names: 238893840

Gene position: 1711956-1711195 (Counterclockwise)

Preceding gene: 238893842

Following gene: 238893839

Centisome position: 32.62

GC content: 59.45

Gene sequence:

>762_bases
ATGGCTGAGCCAACGGCGGGATTTTCGTTGAACGTGCTGACAATTAACACCCATAAAGGCTTTACGGCGTTTAATCGGCG
TTTTATTTTGCCCGAACTGCGCGACGCCGTGCGCAGCGTTAGCGCGGATATTGTTTGCCTGCAGGAGGTGATGGGCGCTC
ATGAGGTACATCCGCTGCACATCGAAAACTGGCCGGATACGACCCATTATGAATTTCTCGCCGACACCATGTGGAGCGAC
TACGCCTACGGGCGCAATGCGGTTTATCCGGAAGGCCACCACGGCAACGCCGTGCTGTCGCGCTTTCCCATTGAATACTA
CGAAAATCGCGATATCTCGGTCGGCAACGGGGAGAAGCGCGGCCTGCTGTACTGCCGCATCGTGCCGCCGCGGAGCGGGA
TAACTATTCACGTGATTTGCGTCCATCTCGGTCTACGCGCCGACCAACGGCAGGCGCAGTTGACCATGCTGGCGGAGTGG
GTCAATACCCTGCCCGCGGGCGAGCCGGTGGTGGTGGCTGGCGATTTTAACGACTGGCGTCAGCAGGCTAACCAGCCGTT
AAAAGCCCAGGCCGGGCTGGAAGAGATCTTTACCCGCGCCCGCGGACGGCCGGCGCGCACCTTTCCGGTCAGTTTTCCGC
TGCTGCGCCTCGACCGCATTTACGTCAAGAACGCCCACGCCAGTCGCCCGAAGGCGCTGGCCCTTAAACAATGGCGGCAT
CTGTCCGATCATGCACCCCTTAGCGTGGAGATACATTTGTGA

Upstream 100 bases:

>100_bases
CTCAGAGTACCGCACTTTACGGAAAATTCCGTAACACCGCATCTTTTTGTGACGTCTACTACACTATTTTATTCAGGAAA
GTGACATTTACTGGAGAATT

Downstream 100 bases:

>100_bases
AATGTCGTTGGCAGGAAGGCAACCGCATTACGCTACTGGAGAATGGCGACCAGTACTATCCGGCGCTGTTTGCGGCCATC
GGTCGCGCCAGCCGGCGGGT

Product: putative DNase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAEPTAGFSLNVLTINTHKGFTAFNRRFILPELRDAVRSVSADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSD
YAYGRNAVYPEGHHGNAVLSRFPIEYYENRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQRQAQLTMLAEW
VNTLPAGEPVVVAGDFNDWRQQANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQWRH
LSDHAPLSVEIHL

Sequences:

>Translated_253_residues
MAEPTAGFSLNVLTINTHKGFTAFNRRFILPELRDAVRSVSADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSD
YAYGRNAVYPEGHHGNAVLSRFPIEYYENRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQRQAQLTMLAEW
VNTLPAGEPVVVAGDFNDWRQQANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQWRH
LSDHAPLSVEIHL
>Mature_252_residues
AEPTAGFSLNVLTINTHKGFTAFNRRFILPELRDAVRSVSADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDY
AYGRNAVYPEGHHGNAVLSRFPIEYYENRDISVGNGEKRGLLYCRIVPPRSGITIHVICVHLGLRADQRQAQLTMLAEWV
NTLPAGEPVVVAGDFNDWRQQANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQWRHL
SDHAPLSVEIHL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=253, Percent_Identity=82.6086956521739, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28659; Mature: 28528

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPTAGFSLNVLTINTHKGFTAFNRRFILPELRDAVRSVSADIVCLQEVMGAHEVHPLH
CCCCCCCCEEEEEEEECCCCCHHHCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIEYYENRDISVGNGEKR
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCEECCCCCCC
GLLYCRIVPPRSGITIHVICVHLGLRADQRQAQLTMLAEWVNTLPAGEPVVVAGDFNDWR
CEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
QQANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQWRH
HHCCCCCCHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHH
LSDHAPLSVEIHL
CCCCCCEEEEEEC
>Mature Secondary Structure 
AEPTAGFSLNVLTINTHKGFTAFNRRFILPELRDAVRSVSADIVCLQEVMGAHEVHPLH
CCCCCCCEEEEEEEECCCCCHHHCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IENWPDTTHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIEYYENRDISVGNGEKR
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCEECCCCCCC
GLLYCRIVPPRSGITIHVICVHLGLRADQRQAQLTMLAEWVNTLPAGEPVVVAGDFNDWR
CEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
QQANQPLKAQAGLEEIFTRARGRPARTFPVSFPLLRLDRIYVKNAHASRPKALALKQWRH
HHCCCCCCHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHH
LSDHAPLSVEIHL
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]