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The map label for this gene is ybhS [H]

Identifier: 238893843

GI number: 238893843

Start: 1713822

End: 1714955

Strand: Reverse

Name: ybhS [H]

Synonym: KP1_1775

Alternate gene names: 238893843

Gene position: 1714955-1713822 (Counterclockwise)

Preceding gene: 238893844

Following gene: 238893842

Centisome position: 32.68

GC content: 59.35

Gene sequence:

>1134_bases
ATGGGCAATAGCATTCTCTCCTGGCGGCGGGTCCGCGCCCTGTGCGTCAAAGAGACCCGGCAGATTGTGCGCGATCCCAG
CAGTTGGCTGATCGCGGTGGTGATCCCCCTGCTGCTGCTGTTTATCTTCGGCTACGGCATTAACCTCGACTCCAGCAGGC
TGCGGGTCGGCGTATTGCTTGAGCAGCAGAGCGAAGAGGCGCTGGATTTCGTCCATACCATGACCGGCTCACCCTATATC
GACGCCACCGTCAGCGACAGCCGCAGGCAGCTGATTGAGATGATGCAGGCCGGGCGCATCCGCGCCATGGTGGCCATTCC
GGTGGATTTCGACCGCCAGATGGCCCGCCCCGGCGCCGACGCACCGCTGCAGCTCATCACCGACGGCAGCGAGCCCAATA
CCGCCAACTTCGCTCAGGGCTATGTGGAAGGTATTTGGCAAATCTGGCAGCAGCAGCGGGCGGAAGACCGCGGCGAAACC
TTTGAACCACTGATCGACGTGCAGATGCGCTACTGGTTTAACCCGGCGGCTATTAGCCAGCACTTTATTATCCCTGGGGC
GATCACCATCATCATGACCGTGGTCGGCGCCATACTGACCTCGCTGGTGGTGGCCCGCGAATGGGAGCGCGGCACCATGG
AGGCGCTGCTGTCGACGGAGATCACCCGCGCCGAACTGCTGCTGTGCAAGCTCATTCCCTACTATTTCCTCGGCATGCTG
GCGATGCTGCTGTGTATGCTGGTGTCGGTATTTATTCTCGGCGTGCCCTATCGCGGCTCGCTGCCGATCCTGTTTGTCAT
CACCAGTCTGTTTTTGCTCAGCACCCTGGGGATGGGGCTGCTGATCTCAACCATTACCCGCAACCAGTTTAACGCCGCGC
AGGTGGCGCTGAACGCCGCCTTTTTACCGTCGATTATGCTGTCCGGGTTTATTTTCCAGATAGACAGTATGCCGGCGGTG
ATCCGCGCGGTGACCTATGTGATCCCGGCGCGCTATTTCGTTAGTACTCTGCAAAGCCTGTTTCTGGCGGGCAATATTCC
GGTGGTGCTGCTGGTCAACGTGCTGTTTTTGATTGCGTCGGCGGTGATGTTTATCGGTCTGACGTGGCTGAAAACCAAAC
GGCGTCTGGATTAG

Upstream 100 bases:

>100_bases
GATGAGCTGAAAGCCCAGGCGGCGGACGACAGCCAGACGGACCCGACCATGGAGCAGGCGTTTATTACCCTGATTAACCG
CTGGGACAAGGAGAATAGCC

Downstream 100 bases:

>100_bases
GTTTTGTCCGGTGGCGCTGCGCCGACCGGGCCTACGGTTTAACCAACATCGATTATACGGTTCGCCGATCCCGTAGGCCG
GGCAAACGCAATGCCGCCCG

Product: putative ABC-type transport system inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MGNSILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSRLRVGVLLEQQSEEALDFVHTMTGSPYI
DATVSDSRRQLIEMMQAGRIRAMVAIPVDFDRQMARPGADAPLQLITDGSEPNTANFAQGYVEGIWQIWQQQRAEDRGET
FEPLIDVQMRYWFNPAAISQHFIIPGAITIIMTVVGAILTSLVVAREWERGTMEALLSTEITRAELLLCKLIPYYFLGML
AMLLCMLVSVFILGVPYRGSLPILFVITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAV
IRAVTYVIPARYFVSTLQSLFLAGNIPVVLLVNVLFLIASAVMFIGLTWLKTKRRLD

Sequences:

>Translated_377_residues
MGNSILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSRLRVGVLLEQQSEEALDFVHTMTGSPYI
DATVSDSRRQLIEMMQAGRIRAMVAIPVDFDRQMARPGADAPLQLITDGSEPNTANFAQGYVEGIWQIWQQQRAEDRGET
FEPLIDVQMRYWFNPAAISQHFIIPGAITIIMTVVGAILTSLVVAREWERGTMEALLSTEITRAELLLCKLIPYYFLGML
AMLLCMLVSVFILGVPYRGSLPILFVITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAV
IRAVTYVIPARYFVSTLQSLFLAGNIPVVLLVNVLFLIASAVMFIGLTWLKTKRRLD
>Mature_376_residues
GNSILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSRLRVGVLLEQQSEEALDFVHTMTGSPYID
ATVSDSRRQLIEMMQAGRIRAMVAIPVDFDRQMARPGADAPLQLITDGSEPNTANFAQGYVEGIWQIWQQQRAEDRGETF
EPLIDVQMRYWFNPAAISQHFIIPGAITIIMTVVGAILTSLVVAREWERGTMEALLSTEITRAELLLCKLIPYYFLGMLA
MLLCMLVSVFILGVPYRGSLPILFVITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVI
RAVTYVIPARYFVSTLQSLFLAGNIPVVLLVNVLFLIASAVMFIGLTWLKTKRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=377, Percent_Identity=89.920424403183, Blast_Score=673, Evalue=0.0,
Organism=Escherichia coli, GI48994943, Length=339, Percent_Identity=32.4483775811209, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=25.6716417910448, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI226510979, Length=254, Percent_Identity=27.1653543307087, Blast_Score=86, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24650853, Length=163, Percent_Identity=28.2208588957055, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24650855, Length=163, Percent_Identity=28.2208588957055, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42114; Mature: 41982

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSRLRVGVLL
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
EQQSEEALDFVHTMTGSPYIDATVSDSRRQLIEMMQAGRIRAMVAIPVDFDRQMARPGAD
HHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCC
APLQLITDGSEPNTANFAQGYVEGIWQIWQQQRAEDRGETFEPLIDVQMRYWFNPAAISQ
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCC
HFIIPGAITIIMTVVGAILTSLVVAREWERGTMEALLSTEITRAELLLCKLIPYYFLGML
CEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLCMLVSVFILGVPYRGSLPILFVITSLFLLSTLGMGLLISTITRNQFNAAQVALNAA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FLPSIMLSGFIFQIDSMPAVIRAVTYVIPARYFVSTLQSLFLAGNIPVVLLVNVLFLIAS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVMFIGLTWLKTKRRLD
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNSILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSRLRVGVLL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
EQQSEEALDFVHTMTGSPYIDATVSDSRRQLIEMMQAGRIRAMVAIPVDFDRQMARPGAD
HHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCC
APLQLITDGSEPNTANFAQGYVEGIWQIWQQQRAEDRGETFEPLIDVQMRYWFNPAAISQ
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCC
HFIIPGAITIIMTVVGAILTSLVVAREWERGTMEALLSTEITRAELLLCKLIPYYFLGML
CEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLCMLVSVFILGVPYRGSLPILFVITSLFLLSTLGMGLLISTITRNQFNAAQVALNAA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FLPSIMLSGFIFQIDSMPAVIRAVTYVIPARYFVSTLQSLFLAGNIPVVLLVNVLFLIAS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVMFIGLTWLKTKRRLD
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]