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The map label for this gene is ybdN [H]

Identifier: 238893680

GI number: 238893680

Start: 1543944

End: 1545167

Strand: Reverse

Name: ybdN [H]

Synonym: KP1_1598

Alternate gene names: 238893680

Gene position: 1545167-1543944 (Counterclockwise)

Preceding gene: 238893681

Following gene: 238893679

Centisome position: 29.44

GC content: 55.47

Gene sequence:

>1224_bases
ATGTCGTTTATTAAATATCCCTTACCGGAATCGGTGCTGCAAGCAACTGAGCAGCGGATCCAGTGGGTCATGGATAATTT
TTCGCGCATCTGTGTCTCTTTTTCCGGGGGAAAAGACTCCACCGTTATGCTGCATTTAACCGCCCAGGCGGCGCGGTTAC
AGGGGAAAAAAATCTGCGTGTTGTTTATTGACTGGGAAGCGCAGTTCTCCTGCACCATCGCCCACTGTGAAAAACTGCGT
GCGCTGTATGCGGATGTCATCGAAACCTTTTACTGGGTCGCCCTGCCGCTCACCACCCAAAATGCCCTGACGCAGTATAA
GCCGCAATGGCAATGCTGGGAGCCCGGAACCGAGTGGGTACGCCAGCCGCCGCCCTGGGCCATTACCCACCCGGGCTATT
TTTCATTTTATCAACCCGGAATGAGCTTTGAAGCCTTCGTCAGCCATTTCGCCGAGTGGTTTTCGCAGCGTCGTCCCGCC
GCCGTGCTGGTGGGCATTCGCGCCGACGAATCGCTAAATCGCTTTATGACGATTTCTTCACAGCGTAAACAGCGCTTCGC
CGACGATAAACCATGGACCACTTCAGCGCCGGGCGGCCACGCCTGGTACATCTACCCGCTCTATGACTGGAAAACCGCCG
ATATCTGGACCTGGTTTGCCAAAAGCGGCGAGCCCTATAACCCGTTGTACGATCTGATGTATCAGGCCGGGGTGCCGCTG
CGCTATATGCGCATTTGCGAACCGTTTGGTCCCGAGCAGCGCCAGGGGCTGTGGCTGTATCACGTGCTGGAACCTGAGCG
CTGGGCCGCGATGTGCCAGCGAGTGAGCGGCGCGCACAGCGGCGGGGTCTATGCCGGGCATGATAATCAGTTCTACGGTC
ATCGGAAAATCGACAAGCCCGACCACCTGACGTGGAAAAGCTACGCCCTGTTCCTGCTCGACAGCATGCCGGAAACCACC
GCCGAGCACTACCGCAATAAAATCGCCGTCTACCTGCGCTGGTACCAGAAAAAAGGTATGGAGGATATTCCGGATACCCA
ACCTGCGGACATTGGCACCAAAGATATCCCATCCTGGCGGCGGGTCTGCAAAGTACTGCTCAATAACGATTACTGGTGCC
GTCAGCTTTCGTTTAGCCCAACCAAAAGCAGCCACTATCAGCGCTACCGTAAACGCATGGAAAAACATCGCCAACAATGG
GGGATTTTATGCAACAACAACTGA

Upstream 100 bases:

>100_bases
TTCCCCCGCTGCCAGAAACAATAATCGACCATTAATTTCCTACCCCTCATCGTTTATACTGAGCTAACGGGAATTTTCTA
CTATTAAAGGATTAATGGTC

Downstream 100 bases:

>100_bases
CGCAGGCGCTGGAAGCTTACCTGCAAAAGCTGGATGACGAGGCGCGCATTGAGGCTATCAACGCGTTTCGCCAGGTGCTC
CACCACTACAGCCCCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICVLFIDWEAQFSCTIAHCEKLR
ALYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWVRQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRRPA
AVLVGIRADESLNRFMTISSQRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGVPL
RYMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKPDHLTWKSYALFLLDSMPETT
AEHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWRRVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQW
GILCNNN

Sequences:

>Translated_407_residues
MSFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICVLFIDWEAQFSCTIAHCEKLR
ALYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWVRQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRRPA
AVLVGIRADESLNRFMTISSQRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGVPL
RYMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKPDHLTWKSYALFLLDSMPETT
AEHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWRRVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQW
GILCNNN
>Mature_406_residues
SFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICVLFIDWEAQFSCTIAHCEKLRA
LYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWVRQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRRPAA
VLVGIRADESLNRFMTISSQRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGVPLR
YMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKPDHLTWKSYALFLLDSMPETTA
EHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWRRVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQWG
ILCNNN

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=407, Percent_Identity=73.7100737100737, Blast_Score=657, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 47900; Mature: 47769

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEHHHHHCCCCEEEE
LFIDWEAQFSCTIAHCEKLRALYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWV
EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHCCCCCEECCCCHHHH
RQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRRPAAVLVGIRADESLNRFMTISS
CCCCCCEEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHEEHHH
QRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGVPL
HHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHEEEECCCCCCCCHHHHHHHHCCCCH
RYMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKP
HHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
DHLTWKSYALFLLDSMPETTAEHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWR
CCCCHHHHHHHHHHCCCHHHHHHHHHHEEHEEEEHHHCCCCCCCCCCCCCCCCCCCHHHH
RVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQWGILCNNN
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC
>Mature Secondary Structure 
SFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICV
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEHHHHHCCCCEEEE
LFIDWEAQFSCTIAHCEKLRALYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWV
EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHCCCCCEECCCCHHHH
RQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRRPAAVLVGIRADESLNRFMTISS
CCCCCCEEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHEEHHH
QRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGVPL
HHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHEEEECCCCCCCCHHHHHHHHCCCCH
RYMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKP
HHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
DHLTWKSYALFLLDSMPETTAEHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWR
CCCCHHHHHHHHHHCCCHHHHHHHHHHEEHEEEEHHHCCCCCCCCCCCCCCCCCCCHHHH
RVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQQWGILCNNN
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]