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The map label for this gene is ykfE [H]

Identifier: 238893618

GI number: 238893618

Start: 1473369

End: 1473896

Strand: Reverse

Name: ykfE [H]

Synonym: KP1_1532

Alternate gene names: 238893618

Gene position: 1473896-1473369 (Counterclockwise)

Preceding gene: 238893620

Following gene: 238893616

Centisome position: 28.08

GC content: 56.44

Gene sequence:

>528_bases
ATGTCAGAGTTTGCATTAATCATTCTCTACGCTCACTATAAAGAGGCTTGTTATGAGGACGGAATAAGTCCAGGAGGAAA
CATGTTTAAAGCTCTTACCGCTATCGTCGCCTTAGCCGCCTCCGCCAGCGTTATGGCGCAAGGCGATGTCACGCTGAACA
GTCTGGCTCACGATGCCGCCACCCGGGCGTCGTTTAACCAGATGGTCAAAGGCCATCAGCTGCCCGCCTGGGTGACCACC
GGCGGCACCGGTTCGCCCGCGCAGACGGTGAAGCTGGGTAGCGAATCCTGGCAGGTGTTAAGCGCCTGCAAACCCCACGA
CTGCGGCCATGAACGTATCGCGGTGATCTGGTCGGAAAAAAGCAAACAGATGTCCGGCGTTTACTCGGTGGTCGATGAAA
AAACCGACCAGGAGAAGCTGACCTGGCTTAACGTCAGCGATGCCCTGTCCATCGATGGCAAAACCGTGCTGTTTGCCGCC
CTCAGCGGCAGCCTCGACAACCACCCGGACGCCTTTAACTACCAGTAA

Upstream 100 bases:

>100_bases
TCCCAAGGGCATATATTTGGAAAATAAATCAATCCGCATCATGGCATATCGCTTAGCGTAACGTCCATGCGCGCACCGTT
TCTAATCATTCACAGAAAAT

Downstream 100 bases:

>100_bases
CGACCATCGCCCCCGTCAGCCTTTCCCCGACGGGGGCTTCCCTGATTAGCCATCCGGGAACATCACGCTGTTCCCCGGCG
CTTCCCGATGCAGATGGATA

Product: C-lysozyme inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSEFALIILYAHYKEACYEDGISPGGNMFKALTAIVALAASASVMAQGDVTLNSLAHDAATRASFNQMVKGHQLPAWVTT
GGTGSPAQTVKLGSESWQVLSACKPHDCGHERIAVIWSEKSKQMSGVYSVVDEKTDQEKLTWLNVSDALSIDGKTVLFAA
LSGSLDNHPDAFNYQ

Sequences:

>Translated_175_residues
MSEFALIILYAHYKEACYEDGISPGGNMFKALTAIVALAASASVMAQGDVTLNSLAHDAATRASFNQMVKGHQLPAWVTT
GGTGSPAQTVKLGSESWQVLSACKPHDCGHERIAVIWSEKSKQMSGVYSVVDEKTDQEKLTWLNVSDALSIDGKTVLFAA
LSGSLDNHPDAFNYQ
>Mature_174_residues
SEFALIILYAHYKEACYEDGISPGGNMFKALTAIVALAASASVMAQGDVTLNSLAHDAATRASFNQMVKGHQLPAWVTTG
GTGSPAQTVKLGSESWQVLSACKPHDCGHERIAVIWSEKSKQMSGVYSVVDEKTDQEKLTWLNVSDALSIDGKTVLFAAL
SGSLDNHPDAFNYQ

Specific function: Strong inhibitor of lysozyme C [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ivy family [H]

Homologues:

Organism=Escherichia coli, GI1786413, Length=154, Percent_Identity=68.8311688311688, Blast_Score=235, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014453 [H]

Pfam domain/function: PF08816 Ivy [H]

EC number: NA

Molecular weight: Translated: 18738; Mature: 18607

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFALIILYAHYKEACYEDGISPGGNMFKALTAIVALAASASVMAQGDVTLNSLAHDAA
CCCEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
TRASFNQMVKGHQLPAWVTTGGTGSPAQTVKLGSESWQVLSACKPHDCGHERIAVIWSEK
HHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCC
SKQMSGVYSVVDEKTDQEKLTWLNVSDALSIDGKTVLFAALSGSLDNHPDAFNYQ
CHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SEFALIILYAHYKEACYEDGISPGGNMFKALTAIVALAASASVMAQGDVTLNSLAHDAA
CCEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
TRASFNQMVKGHQLPAWVTTGGTGSPAQTVKLGSESWQVLSACKPHDCGHERIAVIWSEK
HHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCC
SKQMSGVYSVVDEKTDQEKLTWLNVSDALSIDGKTVLFAALSGSLDNHPDAFNYQ
CHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]