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The map label for this gene is betI [H]

Identifier: 238893616

GI number: 238893616

Start: 1470574

End: 1471179

Strand: Reverse

Name: betI [H]

Synonym: KP1_1530

Alternate gene names: 238893616

Gene position: 1471179-1470574 (Counterclockwise)

Preceding gene: 238893618

Following gene: 238893615

Centisome position: 28.03

GC content: 62.38

Gene sequence:

>606_bases
ATGAATGGAGTGGCAAAAATGCCCAAACTGGGGATGCAGCCGATCCGGCGCAGGCAGCTGATCGACGCCACGCTGGACGC
AATAAATGAAGTCGGAATGCACGACGCGACCATCGCGCAGATTGCCCGGCGGGCGGGCGTATCGACGGGGATCATCAGTC
ACTATTTCAAAGACAAAAATGGTCTGCTGGAGGCGACCATGCGCGACATCACCAGCCAGCTGCGCGACGCGGTGCTCAAC
CGTCTGCACGCTCTGCCGGACGGCAGCGCCAGCCAGCGCCTGCAGGCGATTGTCGGCGGCAACTTTGATGAGACGCAGAT
CAGCAGCGCGGCGATGAAGGCCTGGCTGGCCTTTTGGGCCAGCAGCATGCACCAGCCGATGCTTTATCGGTTACAGCAGG
TCAGCAGCCGTCGCCTGCTGTCGAATCTGGTGTACGAATTCCGCCGCGAGCTGCCGCGCGAGCAGGCGCAGGAGGCCGGC
TACGGGCTGGCGGCGCTGATAGACGGCCTGTGGCTGCGGGCGGCGCTCAGCGGCAAACCGCTGGATAAAACGCTGGCGCA
GTCGCTGACCAGCCACTTTATTCGTCAGCATTTACCGAACCCATAA

Upstream 100 bases:

>100_bases
CACTGTTTTTGTAACTATTAAAATCCAAATCCGCAACAATTAAGACACATTTTATATTGAACGTCCAATCAAAAACCGCT
TTAATAGTTAACCAACGCTG

Downstream 100 bases:

>100_bases
CCGAGGAGGCGTTATGTCCCGAATGGCAGAACAGCAGCTTTATATTAATGGTGGTTATACATCGGCCACCAGCGGTCGCA
CCTTCGAGACCATCAACCCT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNGVAKMPKLGMQPIRRRQLIDATLDAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITSQLRDAVLN
RLHALPDGSASQRLQAIVGGNFDETQISSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAG
YGLAALIDGLWLRAALSGKPLDKTLAQSLTSHFIRQHLPNP

Sequences:

>Translated_201_residues
MNGVAKMPKLGMQPIRRRQLIDATLDAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITSQLRDAVLN
RLHALPDGSASQRLQAIVGGNFDETQISSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAG
YGLAALIDGLWLRAALSGKPLDKTLAQSLTSHFIRQHLPNP
>Mature_201_residues
MNGVAKMPKLGMQPIRRRQLIDATLDAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITSQLRDAVLN
RLHALPDGSASQRLQAIVGGNFDETQISSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAG
YGLAALIDGLWLRAALSGKPLDKTLAQSLTSHFIRQHLPNP

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=194, Percent_Identity=93.8144329896907, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22371; Mature: 22371

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGVAKMPKLGMQPIRRRQLIDATLDAINEVGMHDATIAQIARRAGVSTGIISHYFKDKN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCC
GLLEATMRDITSQLRDAVLNRLHALPDGSASQRLQAIVGGNFDETQISSAAMKAWLAFWA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC
LDKTLAQSLTSHFIRQHLPNP
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNGVAKMPKLGMQPIRRRQLIDATLDAINEVGMHDATIAQIARRAGVSTGIISHYFKDKN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCC
GLLEATMRDITSQLRDAVLNRLHALPDGSASQRLQAIVGGNFDETQISSAAMKAWLAFWA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCC
LDKTLAQSLTSHFIRQHLPNP
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA