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The map label for this gene is yafV [H]

Identifier: 238893211

GI number: 238893211

Start: 1052486

End: 1053256

Strand: Reverse

Name: yafV [H]

Synonym: KP1_1077

Alternate gene names: 238893211

Gene position: 1053256-1052486 (Counterclockwise)

Preceding gene: 238893212

Following gene: 238893209

Centisome position: 20.07

GC content: 58.88

Gene sequence:

>771_bases
GTGCCTGGCCTGAAAATTTCGCTGTTGCAACAACCGCTGGTCTGGATGGACGGCCCTGCCAACCTGCGCCATTTTGATCG
CCAACTGGAAGGAATCACCGGGCGCGATGTGATTGTCTTACCAGAGATGTTTACCACCGGCTTTGCCATGGAAGCGGCAA
AACAGTCTTTACCCGAGGCCGACGTGGTGGAGTGGATGCATGCCCGGGCCGCGCAATCCCAGGCGCTGATTGCCGGCAGC
GCTGCGCTGCAAACTGAACACGGCGCTGTTAACCGCTTCCTGCTGGTCGAGCCTGACGGTACGGTGCACCATTATGATAA
ACGGCACCTGTTCCGTATGGCCGATGAACATCATCACTATGAGGCCGGAAACCAGCGCGTGGTCTTTGAATGGCGTGGAT
GGCGGATCCTGCCGCTGGTCTGTTACGACCTGCGCTTTCCGGTATGGTCGCGTAATCAGAACGACTATGATTTGGCGCTG
TATGTCGCCAACTGGCCGGCGCCGCGCTCGCTGCACTGGCAGTCGCTGCTGATCGCCCGCGCGATTGAAAACCAGGCCTA
TGTCGCCGGCTGTAACCGGGTTGGCACTGACGGCAACGGCCATCATTACCGCGGCGATAGTCGGATTATCAATCCCCAGG
GGGAGATTATCGCCACCGCCGATCCGCATCAGGCCACTCGTCTTGATGCCGAGCTGTCGCTGAGCGCCCTTCAGGAATAT
CGTGAAAAATTCCCCGCCTGGCGCGATGCCGATCCTTTCACTATCGGCTAA

Upstream 100 bases:

>100_bases
ATCAGTAGCATTTTTTTAACAAAATATTCCGCGGACCGCCGCGCGGCTGATATGGTGTTACAGTTAACCTAACCCCCTCA
TGAGAATGGAGTTGACCATT

Downstream 100 bases:

>100_bases
TCACCCTTCGGGAGCCGCTGCGCTCCCTTTTTATTCCACCACGATCCGCACAGCACAGTAGACCAATAACGCTGCCAGCA
TCCAGTTCAGTTGCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPGLKISLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTTGFAMEAAKQSLPEADVVEWMHARAAQSQALIAGS
AALQTEHGAVNRFLLVEPDGTVHHYDKRHLFRMADEHHHYEAGNQRVVFEWRGWRILPLVCYDLRFPVWSRNQNDYDLAL
YVANWPAPRSLHWQSLLIARAIENQAYVAGCNRVGTDGNGHHYRGDSRIINPQGEIIATADPHQATRLDAELSLSALQEY
REKFPAWRDADPFTIG

Sequences:

>Translated_256_residues
MPGLKISLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTTGFAMEAAKQSLPEADVVEWMHARAAQSQALIAGS
AALQTEHGAVNRFLLVEPDGTVHHYDKRHLFRMADEHHHYEAGNQRVVFEWRGWRILPLVCYDLRFPVWSRNQNDYDLAL
YVANWPAPRSLHWQSLLIARAIENQAYVAGCNRVGTDGNGHHYRGDSRIINPQGEIIATADPHQATRLDAELSLSALQEY
REKFPAWRDADPFTIG
>Mature_255_residues
PGLKISLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTTGFAMEAAKQSLPEADVVEWMHARAAQSQALIAGSA
ALQTEHGAVNRFLLVEPDGTVHHYDKRHLFRMADEHHHYEAGNQRVVFEWRGWRILPLVCYDLRFPVWSRNQNDYDLALY
VANWPAPRSLHWQSLLIARAIENQAYVAGCNRVGTDGNGHHYRGDSRIINPQGEIIATADPHQATRLDAELSLSALQEYR
EKFPAWRDADPFTIG

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=265, Percent_Identity=24.9056603773585, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1786412, Length=255, Percent_Identity=85.0980392156863, Blast_Score=459, Evalue=1e-131,
Organism=Caenorhabditis elegans, GI17556280, Length=188, Percent_Identity=30.3191489361702, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 29109; Mature: 28978

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLKISLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTTGFAMEAAKQSLPEA
CCCCEEEHHCCCEEEECCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCHH
DVVEWMHARAAQSQALIAGSAALQTEHGAVNRFLLVEPDGTVHHYDKRHLFRMADEHHHY
HHHHHHHHHHHCCCEEEECCHHHCCCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCC
EAGNQRVVFEWRGWRILPLVCYDLRFPVWSRNQNDYDLALYVANWPAPRSLHWQSLLIAR
CCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
AIENQAYVAGCNRVGTDGNGHHYRGDSRIINPQGEIIATADPHQATRLDAELSLSALQEY
HHCCCEEEEECCCCCCCCCCCEECCCCEEECCCCCEEEECCCCHHHHCCHHHHHHHHHHH
REKFPAWRDADPFTIG
HHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PGLKISLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTTGFAMEAAKQSLPEA
CCCEEEHHCCCEEEECCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCCHH
DVVEWMHARAAQSQALIAGSAALQTEHGAVNRFLLVEPDGTVHHYDKRHLFRMADEHHHY
HHHHHHHHHHHCCCEEEECCHHHCCCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCC
EAGNQRVVFEWRGWRILPLVCYDLRFPVWSRNQNDYDLALYVANWPAPRSLHWQSLLIAR
CCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
AIENQAYVAGCNRVGTDGNGHHYRGDSRIINPQGEIIATADPHQATRLDAELSLSALQEY
HHCCCEEEEECCCCCCCCCCCEECCCCEEECCCCCEEEECCCCHHHHCCHHHHHHHHHHH
REKFPAWRDADPFTIG
HHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]