| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028819
Identifier: 238028819
GI number: 238028819
Start: 3736826
End: 3737371
Strand: Reverse
Name: 238028819
Synonym: bglu_1g32840
Alternate gene names: NA
Gene position: 3737371-3736826 (Counterclockwise)
Preceding gene: 238028820
Following gene: 238028818
Centisome position: 95.67
GC content: 71.06
Gene sequence:
>546_bases ATGTTCACGATGATTCCCGAGCTGTCCTTCGGCCGCCGCACGGCGCTCTGGTGGTCCTGCTTCTGGCGCACGTTCCTCGC CACGCTGCCGGTCTGGCTGGCCGCCGTGACGCTGGTGGTGCTCGCCTTGCTGGCCGGCCGGCGCGGCACGCCGAACGTCG TCTCGGAGGCGGCCGCCTCGCTGTACGGGATGATCTTCTACGGCGGCCTGCTGGTGGTGCTGGTGAGCGTGCTGTGCCTG CCGATCGTCGGCTACATGACGCGCCGCGGTTTCGCCGCGCACGGGCTCACGGTGCCGGCGTCGTTCTCGTTCGGGCAGGC CGTGATGCTCGGGCTGACCACCTGGGGCTGGACCATCGTGGTCTCGCTCGCCACCAACCTGCTGTCCACCGCGCTCAAGT TCGCGGTGGCGCAGGGCGCCGATCTCGCGTCCGCCGGCCTGACGCTGGTGCTGCAACTGCTCGTGCTGGCGCTCGGCCTG ATCGGCACGCTGTACGTGGTCATGCCGCGGCAGGCGTGGCGGCTGCGGCACCAGGCGGGCGGCTGA
Upstream 100 bases:
>100_bases GGGCGGCCGGGGGCGCGCCGTGCCGCGCCCGCCATTGCCCCTGTCCCAGCCGTCGCATTCGACGGTTCGAATTCAACCGC CAGGCAAGCGAGGCGCCACG
Downstream 100 bases:
>100_bases GCCGCGCCGTCGCGCCTGCGGTTGCCGGCGTTGCGCTGGCGCGCCGCTTCCTGCCGCCGTCCGCGGCGCGGGCCGAACGG GTTAACCCGCGCTGTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MFTMIPELSFGRRTALWWSCFWRTFLATLPVWLAAVTLVVLALLAGRRGTPNVVSEAAASLYGMIFYGGLLVVLVSVLCL PIVGYMTRRGFAAHGLTVPASFSFGQAVMLGLTTWGWTIVVSLATNLLSTALKFAVAQGADLASAGLTLVLQLLVLALGL IGTLYVVMPRQAWRLRHQAGG
Sequences:
>Translated_181_residues MFTMIPELSFGRRTALWWSCFWRTFLATLPVWLAAVTLVVLALLAGRRGTPNVVSEAAASLYGMIFYGGLLVVLVSVLCL PIVGYMTRRGFAAHGLTVPASFSFGQAVMLGLTTWGWTIVVSLATNLLSTALKFAVAQGADLASAGLTLVLQLLVLALGL IGTLYVVMPRQAWRLRHQAGG >Mature_181_residues MFTMIPELSFGRRTALWWSCFWRTFLATLPVWLAAVTLVVLALLAGRRGTPNVVSEAAASLYGMIFYGGLLVVLVSVLCL PIVGYMTRRGFAAHGLTVPASFSFGQAVMLGLTTWGWTIVVSLATNLLSTALKFAVAQGADLASAGLTLVLQLLVLALGL IGTLYVVMPRQAWRLRHQAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19414; Mature: 19414
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTMIPELSFGRRTALWWSCFWRTFLATLPVWLAAVTLVVLALLAGRRGTPNVVSEAAAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LYGMIFYGGLLVVLVSVLCLPIVGYMTRRGFAAHGLTVPASFSFGQAVMLGLTTWGWTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VSLATNLLSTALKFAVAQGADLASAGLTLVLQLLVLALGLIGTLYVVMPRQAWRLRHQAG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC G C >Mature Secondary Structure MFTMIPELSFGRRTALWWSCFWRTFLATLPVWLAAVTLVVLALLAGRRGTPNVVSEAAAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LYGMIFYGGLLVVLVSVLCLPIVGYMTRRGFAAHGLTVPASFSFGQAVMLGLTTWGWTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VSLATNLLSTALKFAVAQGADLASAGLTLVLQLLVLALGLIGTLYVVMPRQAWRLRHQAG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA