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The map label for this gene is lolB [H]

Identifier: 238028666

GI number: 238028666

Start: 3558660

End: 3559304

Strand: Direct

Name: lolB [H]

Synonym: bglu_1g31300

Alternate gene names: 238028666

Gene position: 3558660-3559304 (Clockwise)

Preceding gene: 238028665

Following gene: 238028667

Centisome position: 91.1

GC content: 73.02

Gene sequence:

>645_bases
GTGAGCACCACGATTCGAACCGGCGCGCGGCTCGCGCGCCACGCTTGCGCCGTGCTCGCCGCGGGCGCCCTGCTGGCCGG
CTGCGCGACGCGCCCCCAGCCGCCCGCCGGCACGGCGGCGCTCAGCGCCACCAGCGCCACCAGCGCCACCAGCGCCGACA
CGATCATGACGCAGGCCGCGCACGCCTACACGGGCCGCTTCTCGGTCCGCTACGACGACCGGCTCGGCAAGCAGCAGAAC
GTCTACGGCAACTTCGACTGGCAGGAAACCGGCAACGTCATCACGCTCGAACTGCGCAGCCCGCTCGGCCAGACGCTCGC
GGTAGTCCGCTCGTCGCCGCAGCGCGCCTCGCTCGAGATGCCGGGCCGCGCGCCGCGTTTTGCCGGTGACGTCGGGCAGC
TGATGCAGGACACGCTCGGCTTCTCGCTGCCGCTCGACGGCCTGCGCTACTGGATGCTGCCGCGGCCGTCGCCGGGCTCG
CCGGCCGACATCACGGGCGATGCCTCGCACCCGAAGCAGATCCGCCAGGACGGCTGGACCATCGACTACCGCGCCTACGC
GGACGCGCCCGCCACCGGCGTCAGGCGGCTCGATCTCACGCGCGCCGAACCTCCGCTCGACATCAAGCTGGTGCTGGATC
GCTGA

Upstream 100 bases:

>100_bases
AGCGGGACAAGGCCCGCGAAGTCTGGCGTGCTGCGCAAAAGCTCGAGCCCGACAACGACACGCTCGTCAGCACGCTCAAG
CGCTTCGGGGTGAACGGGCT

Downstream 100 bases:

>100_bases
GCCGCGCACTCCGTTTTCCGCCACGAAGTCCCGAAGCATGACCGATACCTCCCGCGCGCTGCGCAACTGCCTCGCCCCCG
CGAAGCTCAACCTGTTCCTG

Product: outer membrane lipoprotein LolB

Products: 5-aminolevulinate; CoA; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTTIRTGARLARHACAVLAAGALLAGCATRPQPPAGTAALSATSATSATSADTIMTQAAHAYTGRFSVRYDDRLGKQQN
VYGNFDWQETGNVITLELRSPLGQTLAVVRSSPQRASLEMPGRAPRFAGDVGQLMQDTLGFSLPLDGLRYWMLPRPSPGS
PADITGDASHPKQIRQDGWTIDYRAYADAPATGVRRLDLTRAEPPLDIKLVLDR

Sequences:

>Translated_214_residues
MSTTIRTGARLARHACAVLAAGALLAGCATRPQPPAGTAALSATSATSATSADTIMTQAAHAYTGRFSVRYDDRLGKQQN
VYGNFDWQETGNVITLELRSPLGQTLAVVRSSPQRASLEMPGRAPRFAGDVGQLMQDTLGFSLPLDGLRYWMLPRPSPGS
PADITGDASHPKQIRQDGWTIDYRAYADAPATGVRRLDLTRAEPPLDIKLVLDR
>Mature_213_residues
STTIRTGARLARHACAVLAAGALLAGCATRPQPPAGTAALSATSATSATSADTIMTQAAHAYTGRFSVRYDDRLGKQQNV
YGNFDWQETGNVITLELRSPLGQTLAVVRSSPQRASLEMPGRAPRFAGDVGQLMQDTLGFSLPLDGLRYWMLPRPSPGSP
ADITGDASHPKQIRQDGWTIDYRAYADAPATGVRRLDLTRAEPPLDIKLVLDR

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 22948; Mature: 22817

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTIRTGARLARHACAVLAAGALLAGCATRPQPPAGTAALSATSATSATSADTIMTQAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH
HAYTGRFSVRYDDRLGKQQNVYGNFDWQETGNVITLELRSPLGQTLAVVRSSPQRASLEM
HHHCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC
PGRAPRFAGDVGQLMQDTLGFSLPLDGLRYWMLPRPSPGSPADITGDASHPKQIRQDGWT
CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCE
IDYRAYADAPATGVRRLDLTRAEPPLDIKLVLDR
EEEEEECCCCCCCCEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure 
STTIRTGARLARHACAVLAAGALLAGCATRPQPPAGTAALSATSATSATSADTIMTQAA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH
HAYTGRFSVRYDDRLGKQQNVYGNFDWQETGNVITLELRSPLGQTLAVVRSSPQRASLEM
HHHCCEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC
PGRAPRFAGDVGQLMQDTLGFSLPLDGLRYWMLPRPSPGSPADITGDASHPKQIRQDGWT
CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCE
IDYRAYADAPATGVRRLDLTRAEPPLDIKLVLDR
EEEEEECCCCCCCCEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Succinyl-CoA; glycine [C]

Specific reaction: Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [C]

General reaction: Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA