| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028630
Identifier: 238028630
GI number: 238028630
Start: 3518121
End: 3518600
Strand: Reverse
Name: 238028630
Synonym: bglu_1g30940
Alternate gene names: NA
Gene position: 3518600-3518121 (Counterclockwise)
Preceding gene: 238028631
Following gene: 238028627
Centisome position: 90.07
GC content: 71.88
Gene sequence:
>480_bases ATGGAAGCCCAAGACCACGTCGCGATTCTTCAGCAATTCGGCCGGACCTATCGCGCGTTCCTTGCCGCGTTCGAGGCCCA TGTCGGCCAGCCGATGCCGCGCTGGCGGATCCTGCTCGCGCTGCATGACGAGCGCGGCACCGCCTCGCAAAAGCGGCTCG TCGAGCTGTTGCGCACCGATCCCGGCGCGCTCACGCGGCAACTGAAATCGCTCGAGGCGCTGGGCTGGATCGCGCGCGCC TCCGATCCGCGCGACAACCGCGTGACCAACGTGACGCTGACCGCCGCCGGTCGCGAGGCGTTCGACGAGTGCATGCCGCG CCGCGCCGCGTTTCTCGACGAGACGATGTCGGCGCTGCCCGACGATGCGCTGAGCGCGCTGTCGGCGGCGCTCACGCTGC TCGAGGCGCGCATCGCCGAGGTCGGCAGCGCCGCCGCGGCGGAAACCGGCGAGGCCGCGCGCCGGCGCTCGGCGCTCTGA
Upstream 100 bases:
>100_bases CCGAGTGAGCGGCGCGGCCGGCGCCCGCGCGCCAAGCGCCGCCCGCGCCGGTCCGCCCGCGAGGCCGGTCCGCGTCATTC ACCCGTCATCGTTCTGAATC
Downstream 100 bases:
>100_bases GCCGCGGGCCACGCGGTGTCCCGGTTTCGTCCACCGCGCCGCGCGGCCGCCTACAGTTCGATGCGGGTGCCGAGCAGCGC CAGGAACTGCGCGATCCAGG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein MarR; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulatory Protein Marr; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEAQDHVAILQQFGRTYRAFLAAFEAHVGQPMPRWRILLALHDERGTASQKRLVELLRTDPGALTRQLKSLEALGWIARA SDPRDNRVTNVTLTAAGREAFDECMPRRAAFLDETMSALPDDALSALSAALTLLEARIAEVGSAAAAETGEAARRRSAL
Sequences:
>Translated_159_residues MEAQDHVAILQQFGRTYRAFLAAFEAHVGQPMPRWRILLALHDERGTASQKRLVELLRTDPGALTRQLKSLEALGWIARA SDPRDNRVTNVTLTAAGREAFDECMPRRAAFLDETMSALPDDALSALSAALTLLEARIAEVGSAAAAETGEAARRRSAL >Mature_159_residues MEAQDHVAILQQFGRTYRAFLAAFEAHVGQPMPRWRILLALHDERGTASQKRLVELLRTDPGALTRQLKSLEALGWIARA SDPRDNRVTNVTLTAAGREAFDECMPRRAAFLDETMSALPDDALSALSAALTLLEARIAEVGSAAAAETGEAARRRSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17353; Mature: 17353
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAQDHVAILQQFGRTYRAFLAAFEAHVGQPMPRWRILLALHDERGTASQKRLVELLRTD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHHCC PGALTRQLKSLEALGWIARASDPRDNRVTNVTLTAAGREAFDECMPRRAAFLDETMSALP CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC DDALSALSAALTLLEARIAEVGSAAAAETGEAARRRSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAQDHVAILQQFGRTYRAFLAAFEAHVGQPMPRWRILLALHDERGTASQKRLVELLRTD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHHCC PGALTRQLKSLEALGWIARASDPRDNRVTNVTLTAAGREAFDECMPRRAAFLDETMSALP CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC DDALSALSAALTLLEARIAEVGSAAAAETGEAARRRSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA