| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ilvA [H]
Identifier: 238028623
GI number: 238028623
Start: 3510483
End: 3512006
Strand: Direct
Name: ilvA [H]
Synonym: bglu_1g30870
Alternate gene names: 238028623
Gene position: 3510483-3512006 (Clockwise)
Preceding gene: 238028604
Following gene: 238028624
Centisome position: 89.86
GC content: 70.6
Gene sequence:
>1524_bases ATGGCTGCTCACGATTACCTGAAGAAGATCCTCACCGCGCGCGTCTACGACGTGGCGGTCGAAACCGCGCTTGAGGCGGC CCGCAACCTGTCCGCGCGCGTGCGCAACCGCGTGCTGCTCAAGCGCGAGGACAACCAGCCGGTGTTCTCGTTCAAGCTGC GCGGCGCCTACAACCGCATGGCCCAGCTGGGCGCCGACGCGCTCGCGCGCGGCGTGATCACCGCCTCGGCCGGCAACCAC GCCCAGGGCGTCGCGTTCTCGGCCGCGCGCCTGGGCGTGAAGGCGGTGATCGTGGTGCCGGTCACCACCCCGCAGGTCAA GGTCGACGCGGTGCGCGCGCACGGCGGGCCGACCGTCGAGGTGATCCAGGCCGGCGAATCGTTCAGCGACGCCTATGCCC ACGCGCTCGAGCTGCAGCGCCAGCGCGAGCTGACCTTCGTGCACCCGTTCGACGATCCCGAGGTGATCGCCGGCCAGGGC ACCGTGGCGATGGAAGTGCTGCGCCAGCACCAGGGGCCGATCCACGCGATCTTCGTGCCGATCGGCGGCGGCGGGCTCGC GGCCGGCGTGGCCGCCTACGTGAAGGCGGTGCGCCCGGAGATCCGCGTGATCGGGGTGCAGACCGAGGACTCCTGCGCGA TGGCGAAGTCGATCCGCGCCGGCGAGCGCGTGATGCTCGCCGAGGTGGGCCTGTTCTCGGACGGCACGGCCGTGAAGCAG GTCGGCGAGGAAACGTTCCGGCTCTGCCGCGCGCTGCTCGACGAGGTGATCACGGTGGACACCGACGCGCTGTGCGCGGC GATCAAGGACGTGTTCCAGGACACGCGCAGCGTGCTGGAGCCGGCCGGCGCGCTGGCCGTGGCGGGCGCCAAGCGCTACG CGGCGCGCACCGGCATCGAGGGCGAGACGCTGGTGGCGATCACCTCGGGCGCCAACATGAACTTCGACCGGATGCGCTTC GTGGCCGAGCGCGCCGAGGTGGGCGAGGCGCGCGAGGCGGTGTTCGCGGTGACGATCCCCGAGGAGCGCGGCAGCTTCCG GCGCTTCTGCGAGCTGGTGGGCGAGCGCAGCGTGACGGAGTTCAACTACCGGATCGCCGACGAGCGCGCCGCGCACATTT TCGTGGGCGTGCAGATCCGGCGCCGCGAGGAATCGGCCGAGATCGCGGCGAACTTCGGCGCGCACGGCTTCGAGGCGGCC GACCTGACCGGCGACGAGCTGTCGAAGGATCACATTCGCTACATGGTGGGCGGGCGCTCGCCGCTCTCGCGCGACGAGCG GCTGTTCCGCTTCGAGTTTCCGGAGCGCCCGGGCGCGCTGATGAAGTTTCTCTCGGCGATGGCGCCGAACTGGAACATCA GCCTGTTCCACTACCGCAACCAGGGCGCGGACTACAGCTCGATCCTGGTCGGGCTGCAGGTGCCCGGCGCCGATCACGCC ACGTTCGACCGGTTCCTGGCCGCGCTCGGCTATCCCTATCACGAAGAGACCGCGAACCCGGCCTACCGGCTGTTCCTGGC GTAA
Upstream 100 bases:
>100_bases GCCGGTCAACGGGCCAGCCGGCCCGCCGGGCCGGGGTTGGCGCTAAAATCCCGACTTTCCCCGCTTATCTGGCGCGCCGG TCGATACCCGCGCGACCGTC
Downstream 100 bases:
>100_bases TTGCAGAGAGACGCTCGATGACTCCCGAACATTCCCCGCTCGGCAAGGCCGCCGTCTACACGACCGACTACGACGCCGCG CTGCTGTTTCCGATCCCGCG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MAAHDYLKKILTARVYDVAVETALEAARNLSARVRNRVLLKREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNH AQGVAFSAARLGVKAVIVVPVTTPQVKVDAVRAHGGPTVEVIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQG TVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQ VGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRF VAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTEFNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAA DLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGALMKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHA TFDRFLAALGYPYHEETANPAYRLFLA
Sequences:
>Translated_507_residues MAAHDYLKKILTARVYDVAVETALEAARNLSARVRNRVLLKREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNH AQGVAFSAARLGVKAVIVVPVTTPQVKVDAVRAHGGPTVEVIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQG TVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQ VGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRF VAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTEFNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAA DLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGALMKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHA TFDRFLAALGYPYHEETANPAYRLFLA >Mature_506_residues AAHDYLKKILTARVYDVAVETALEAARNLSARVRNRVLLKREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNHA QGVAFSAARLGVKAVIVVPVTTPQVKVDAVRAHGGPTVEVIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQGT VAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQV GEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRFV AERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTEFNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAAD LTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGALMKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHAT FDRFLAALGYPYHEETANPAYRLFLA
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=299, Percent_Identity=33.4448160535117, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI33469958, Length=317, Percent_Identity=28.7066246056782, Blast_Score=76, Evalue=7e-14, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=55.3571428571429, Blast_Score=526, Evalue=1e-151, Organism=Escherichia coli, GI1789505, Length=311, Percent_Identity=36.3344051446945, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71991565, Length=318, Percent_Identity=29.874213836478, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17537387, Length=344, Percent_Identity=32.8488372093023, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17508781, Length=276, Percent_Identity=30.7971014492754, Blast_Score=123, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320930, Length=517, Percent_Identity=48.3558994197292, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6322631, Length=306, Percent_Identity=32.3529411764706, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319788, Length=271, Percent_Identity=25.4612546125461, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21355833, Length=314, Percent_Identity=28.9808917197452, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=27.0588235294118, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55206; Mature: 55075
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00889 CNMP_BINDING_2 ; PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHDYLKKILTARVYDVAVETALEAARNLSARVRNRVLLKREDNQPVFSFKLRGAYNRM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEECHHHHHH AQLGADALARGVITASAGNHAQGVAFSAARLGVKAVIVVPVTTPQVKVDAVRAHGGPTVE HHHCHHHHHHCEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCEEE VIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVP EEECCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEE IGGGGLAAGVAAYVKAVRPEIRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQ ECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHH VGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCC GETLVAITSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCHHHHHHHHHCCCCEEE FNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRS EEEEECCCCCEEEEEEEEEEECCHHHHHHHHCCCCCCEECCCCCCCCCHHHHEEEECCCC PLSRDERLFRFEFPERPGALMKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHA CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHH TFDRFLAALGYPYHEETANPAYRLFLA HHHHHHHHHCCCCHHCCCCCCEEEEEC >Mature Secondary Structure AAHDYLKKILTARVYDVAVETALEAARNLSARVRNRVLLKREDNQPVFSFKLRGAYNRM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEECHHHHHH AQLGADALARGVITASAGNHAQGVAFSAARLGVKAVIVVPVTTPQVKVDAVRAHGGPTVE HHHCHHHHHHCEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCEEE VIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVP EEECCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEE IGGGGLAAGVAAYVKAVRPEIRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQ ECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHH VGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCC GETLVAITSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCHHHHHHHHHCCCCEEE FNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRS EEEEECCCCCEEEEEEEEEEECCHHHHHHHHCCCCCCEECCCCCCCCCHHHHEEEECCCC PLSRDERLFRFEFPERPGALMKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHA CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHH TFDRFLAALGYPYHEETANPAYRLFLA HHHHHHHHHCCCCHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA