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The map label for this gene is fdhD [H]

Identifier: 238028604

GI number: 238028604

Start: 3486742

End: 3487578

Strand: Direct

Name: fdhD [H]

Synonym: bglu_1g30680

Alternate gene names: 238028604

Gene position: 3486742-3487578 (Clockwise)

Preceding gene: 238028602

Following gene: 238028623

Centisome position: 89.25

GC content: 71.33

Gene sequence:

>837_bases
GTGAATCCGTCCGATCCGCTCGCCCCCGACCTCGAACCGCACGGCAGCGTCGAGGTGGCGATCTCGCGCCATCGTGGCGC
CGAGGCCATCGCCACCGCCGACCACGTCGGCCAGGAATGGCCGATCGCGCTGGTGTTCAATGGCATCTCGCACGCGGTGA
TGATGGGCACGCCGCGCGATCTGGAAGCGTTCGCGGTCGGCTTCGCGATTTCCGAGGGGATCGTCACGCGCGGCGCCGAC
ATCAAGGACATCGAGGTGGTGCTGCACGCCGACGCACCGATTCCGCACGCCGAAGTGCAGCTCGAGGTGGTCCAGCAGGC
GTTCCTCGCGCTGAAGGAAAAACGCCGCTCGCTGGCGGGGCGCTCCGGCTGCGGCGTGTGCGGCATCGAGAGCATCGACC
TGCTCGACCTCACCCCCGAGCGCGTGTCGGCGACGGACTTTCTCGCGCGCCTCGCGCCCGACGCGCTCGCGCAGGCCGCG
CGCGCCCTGCCCGCGCACCAGGCGCTCACCAAGCTCACCGGCGGCCTGCACGCGGCCGCCTGGTGCGACGCGGCCGGCGC
GATCCGCTACGCGTTCGAGGACGTCGGCCGCCACAACGCGCTCGACAAGCTGATCGGCCGTCTCACGCTCGCGCGCGCCG
ACCCGAGCGACGGCTTCGTGTTCCTGTCGAGCCGCGCGAGCTACGAACTGGTGCGCAAGGCCGCGCGCGTCGGCATTCCG
CTGGTGGCGACGATCTCGGCGCCCTCGACGCTGGCCATCGCGATCGCGAAGGCAGCGGGGCTGCGGCTCGTCAGTTTCTG
CCGCGAGTCCGGCTACGTCGATTACGGCACGGCCTGA

Upstream 100 bases:

>100_bases
GGCCCGGCGGGTTTCGCCGCGTTCCGGTATTGTAGAACCCGTCCGCGCGGCGCGCCTTGCGCCGCTCGGCCTGATCCGTA
TGCCCCGCTGGAGTGTCGCC

Downstream 100 bases:

>100_bases
GGCCGCTGCGGCCAGGCCGGGCGCGCGCAAGCCGCGGTCCGGCCTCGGCGCCGGCGAAACCCTGCCCGCGCGCCGCGACG
CACGGCTGCCGGCGGCAATC

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNPSDPLAPDLEPHGSVEVAISRHRGAEAIATADHVGQEWPIALVFNGISHAVMMGTPRDLEAFAVGFAISEGIVTRGAD
IKDIEVVLHADAPIPHAEVQLEVVQQAFLALKEKRRSLAGRSGCGVCGIESIDLLDLTPERVSATDFLARLAPDALAQAA
RALPAHQALTKLTGGLHAAAWCDAAGAIRYAFEDVGRHNALDKLIGRLTLARADPSDGFVFLSSRASYELVRKAARVGIP
LVATISAPSTLAIAIAKAAGLRLVSFCRESGYVDYGTA

Sequences:

>Translated_278_residues
MNPSDPLAPDLEPHGSVEVAISRHRGAEAIATADHVGQEWPIALVFNGISHAVMMGTPRDLEAFAVGFAISEGIVTRGAD
IKDIEVVLHADAPIPHAEVQLEVVQQAFLALKEKRRSLAGRSGCGVCGIESIDLLDLTPERVSATDFLARLAPDALAQAA
RALPAHQALTKLTGGLHAAAWCDAAGAIRYAFEDVGRHNALDKLIGRLTLARADPSDGFVFLSSRASYELVRKAARVGIP
LVATISAPSTLAIAIAKAAGLRLVSFCRESGYVDYGTA
>Mature_278_residues
MNPSDPLAPDLEPHGSVEVAISRHRGAEAIATADHVGQEWPIALVFNGISHAVMMGTPRDLEAFAVGFAISEGIVTRGAD
IKDIEVVLHADAPIPHAEVQLEVVQQAFLALKEKRRSLAGRSGCGVCGIESIDLLDLTPERVSATDFLARLAPDALAQAA
RALPAHQALTKLTGGLHAAAWCDAAGAIRYAFEDVGRHNALDKLIGRLTLARADPSDGFVFLSSRASYELVRKAARVGIP
LVATISAPSTLAIAIAKAAGLRLVSFCRESGYVDYGTA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=235, Percent_Identity=44.6808510638298, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29255; Mature: 29255

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSDPLAPDLEPHGSVEVAISRHRGAEAIATADHVGQEWPIALVFNGISHAVMMGTPRD
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCC
LEAFAVGFAISEGIVTRGADIKDIEVVLHADAPIPHAEVQLEVVQQAFLALKEKRRSLAG
HHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RSGCGVCGIESIDLLDLTPERVSATDFLARLAPDALAQAARALPAHQALTKLTGGLHAAA
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCHHHH
WCDAAGAIRYAFEDVGRHNALDKLIGRLTLARADPSDGFVFLSSRASYELVRKAARVGIP
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
LVATISAPSTLAIAIAKAAGLRLVSFCRESGYVDYGTA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNPSDPLAPDLEPHGSVEVAISRHRGAEAIATADHVGQEWPIALVFNGISHAVMMGTPRD
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCC
LEAFAVGFAISEGIVTRGADIKDIEVVLHADAPIPHAEVQLEVVQQAFLALKEKRRSLAG
HHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RSGCGVCGIESIDLLDLTPERVSATDFLARLAPDALAQAARALPAHQALTKLTGGLHAAA
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCHHHH
WCDAAGAIRYAFEDVGRHNALDKLIGRLTLARADPSDGFVFLSSRASYELVRKAARVGIP
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
LVATISAPSTLAIAIAKAAGLRLVSFCRESGYVDYGTA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA