Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is mmgC [H]

Identifier: 238028608

GI number: 238028608

Start: 3492440

End: 3494227

Strand: Reverse

Name: mmgC [H]

Synonym: bglu_1g30720

Alternate gene names: 238028608

Gene position: 3494227-3492440 (Counterclockwise)

Preceding gene: 238028609

Following gene: 238028607

Centisome position: 89.45

GC content: 65.6

Gene sequence:

>1788_bases
ATGGGACAGTACGTTGCCCCGCTGCGCGACATGCAATTCGTGCTGCACGAGTTGCTCAACGTCGAAGCCGAACTGAAGCA
GATGCCGAAACACGCGGATCTCGATGCCGACACCATCAATCAGGTGCTCGAGGAAGCCGGCAAGTTCTGCGCCGAGGTGC
TGTTCCCGCTCAACCAGGTGGGCGACCGCGAAGGCTGCAAGTACCAGGGTGACGGCGTGGTCACCACGCCCACCGGCTTC
AAGGATGCTTACCGCCAGTACATCGACGCCGGCTGGCCCGCGCTCGGGTGCGACCCCGAGTATGGCGGCCAGGGCCTGCC
CGCGTTCGTCAACAACGCGCTCTACGAGATGATGAACTCGGCGAACCAGGCCTGGACCATGTATCCGGGCCTGTCGCACG
GCGCCTACGAATGCCTGCACGCGCACGGCGCGCCGGAATTGCAGCAGCAATACCTGCCGAAGCTCGTGTCGGGCGAATGG
ACCGGCACCATGTGCCTGACCGAGCCGCATTGCGGCACCGACCTCGGCATCCTGCGCACCAAGGCCGAGCCGATCGGCGA
CGGCGCCTACTCGATCAGCGGCACGAAGATCTTCATCTCGAGCGGCGAGCACGACATGTCGGCCAACATCGTCCACCTGG
TGCTCGCGCGCCTGCCGGACGCGCCGCAGGGCACCAAGGGCATTTCGCTGTTCATCGTGCCGAAGTTCATCCCCGACGCC
TCGGGCGAGCCGGGCGAGCGCAACGGCATCAAGTGCGGCTCGATCGAGCACAAGATGGGCATCCACGGCAACGCCACCTG
CGTGATGAATCTCGACAACGCGAAGGGCTGGCTGGTGGGCGAGCCCAACAAGGGCTTGAACGCGATGTTCGTGATGATGA
ACGCCGCGCGCCTCGGCGTCGGGATGCAGGGTCTCGGCCTGACCGAGGTGGCCTACCAGAACTCGCTGGCCTACGCGAAG
GAGCGCCTGCAGATGCGCTCGCTGACGGGCCCGAAGGCGCCTGAGAAGGCCGCCGACCCGATCATCGTGCACCCCGACGT
GCGCCGCATGCTGCTCACGCAGAAGGCCTATGCGGAAGGCGCGCGCGCGTTCACGTACTGGGCCGCGCTGCAGATCGACA
AGGAGCTGTCGCACGGCGACGAGTCGGTGCGCAAGGAGTCGGCCGACCTGGTCGCGCTGCTCACGCCGATCATCAAGGCG
TTCCTGACCGACAACGCGTTCGAGTGCACCAACCACGCGATGCAGATCTACGGCGGGCACGGCTTCATCTCCGAATGGGG
CATGGAGCAGTACGTGCGCGATGCGCGCATCAACATGATCTACGAGGGCACCAACTCGATCCAGTCGCTGGACCTGCTGG
GCCGCAAGGTGCTCGGCGACATGGGCGCGAAGCTCAAGAAGTTCGGCGCCATCGTGACCGAGTTCGTCGAGTCCGAGGGC
GTGAAGCCCGAGATGGCCGAGTTCATTAATCCGCTGGCCGACATCGGCGAGAAGCTGCAGAAGCTGACCATGGAAATCGG
CATGAAGGCGATGCAGAACCCGGACGAGGTGGGCGCAGCCGCGGTGCCGTACCTGCGCACCGCCGGGCACCTCGTGTTCG
CCTACTTCTGGGCTCGCATGGCGCGCCTCGCGCTCGACAAGGAAGCCTCGGGCGATCCGTTCTACAAGTCGAAGCTGGCC
ACCGCGCGCTTCTATTTCGCGCGCCTGCTGCCCGAGACCGCGGCCACCATCCGCGCCGCGCGCGCCGGCTCGAAGACGCT
GATGGAAGTCGACGAAGCGCTGTTCTGA

Upstream 100 bases:

>100_bases
CGCTGGAAAAGACGATCGTTTCGTATCAGAGCGAGAGCCGGTAGCGGTGCCGTGACGCCCGCGCGAGGCTCGAGCCAGTG
CCCTACCTTTGGAGAGAGTC

Downstream 100 bases:

>100_bases
CAACTTGCCCGGGTACGCGCGCCGCATGAGGCGCGTACCCGGGCGCCCGCAGCCGATTCATTTGCCGCGCCGTCCGCAGC
CAGCCCCGCCGGGCGCGACG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGQYVAPLRDMQFVLHELLNVEAELKQMPKHADLDADTINQVLEEAGKFCAEVLFPLNQVGDREGCKYQGDGVVTTPTGF
KDAYRQYIDAGWPALGCDPEYGGQGLPAFVNNALYEMMNSANQAWTMYPGLSHGAYECLHAHGAPELQQQYLPKLVSGEW
TGTMCLTEPHCGTDLGILRTKAEPIGDGAYSISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDA
SGEPGERNGIKCGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSLAYAK
ERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFTYWAALQIDKELSHGDESVRKESADLVALLTPIIKA
FLTDNAFECTNHAMQIYGGHGFISEWGMEQYVRDARINMIYEGTNSIQSLDLLGRKVLGDMGAKLKKFGAIVTEFVESEG
VKPEMAEFINPLADIGEKLQKLTMEIGMKAMQNPDEVGAAAVPYLRTAGHLVFAYFWARMARLALDKEASGDPFYKSKLA
TARFYFARLLPETAATIRAARAGSKTLMEVDEALF

Sequences:

>Translated_595_residues
MGQYVAPLRDMQFVLHELLNVEAELKQMPKHADLDADTINQVLEEAGKFCAEVLFPLNQVGDREGCKYQGDGVVTTPTGF
KDAYRQYIDAGWPALGCDPEYGGQGLPAFVNNALYEMMNSANQAWTMYPGLSHGAYECLHAHGAPELQQQYLPKLVSGEW
TGTMCLTEPHCGTDLGILRTKAEPIGDGAYSISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDA
SGEPGERNGIKCGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSLAYAK
ERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFTYWAALQIDKELSHGDESVRKESADLVALLTPIIKA
FLTDNAFECTNHAMQIYGGHGFISEWGMEQYVRDARINMIYEGTNSIQSLDLLGRKVLGDMGAKLKKFGAIVTEFVESEG
VKPEMAEFINPLADIGEKLQKLTMEIGMKAMQNPDEVGAAAVPYLRTAGHLVFAYFWARMARLALDKEASGDPFYKSKLA
TARFYFARLLPETAATIRAARAGSKTLMEVDEALF
>Mature_594_residues
GQYVAPLRDMQFVLHELLNVEAELKQMPKHADLDADTINQVLEEAGKFCAEVLFPLNQVGDREGCKYQGDGVVTTPTGFK
DAYRQYIDAGWPALGCDPEYGGQGLPAFVNNALYEMMNSANQAWTMYPGLSHGAYECLHAHGAPELQQQYLPKLVSGEWT
GTMCLTEPHCGTDLGILRTKAEPIGDGAYSISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDAS
GEPGERNGIKCGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGVGMQGLGLTEVAYQNSLAYAKE
RLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEGARAFTYWAALQIDKELSHGDESVRKESADLVALLTPIIKAF
LTDNAFECTNHAMQIYGGHGFISEWGMEQYVRDARINMIYEGTNSIQSLDLLGRKVLGDMGAKLKKFGAIVTEFVESEGV
KPEMAEFINPLADIGEKLQKLTMEIGMKAMQNPDEVGAAAVPYLRTAGHLVFAYFWARMARLALDKEASGDPFYKSKLAT
ARFYFARLLPETAATIRAARAGSKTLMEVDEALF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=372, Percent_Identity=26.8817204301075, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI7656849, Length=385, Percent_Identity=25.974025974026, Blast_Score=117, Evalue=4e-26,
Organism=Homo sapiens, GI21361497, Length=364, Percent_Identity=27.7472527472527, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI4557233, Length=316, Percent_Identity=30.0632911392405, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4557235, Length=420, Percent_Identity=26.1904761904762, Blast_Score=106, Evalue=8e-23,
Organism=Homo sapiens, GI76496475, Length=420, Percent_Identity=26.1904761904762, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI226958412, Length=447, Percent_Identity=24.6085011185682, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958414, Length=396, Percent_Identity=24.4949494949495, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI4501857, Length=324, Percent_Identity=27.4691358024691, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4557231, Length=314, Percent_Identity=29.2993630573248, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI187960098, Length=314, Percent_Identity=29.2993630573248, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4503943, Length=425, Percent_Identity=25.1764705882353, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI87082384, Length=344, Percent_Identity=26.7441860465116, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI87081958, Length=402, Percent_Identity=27.363184079602, Blast_Score=82, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=427, Percent_Identity=26.9320843091335, Blast_Score=128, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17508101, Length=355, Percent_Identity=28.4507042253521, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17569725, Length=370, Percent_Identity=29.7297297297297, Blast_Score=119, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=429, Percent_Identity=28.6713286713287, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=406, Percent_Identity=27.0935960591133, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=27.3209549071618, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=380, Percent_Identity=26.0526315789474, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=398, Percent_Identity=26.8844221105528, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=398, Percent_Identity=26.8844221105528, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=318, Percent_Identity=25.1572327044025, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=230, Percent_Identity=30, Blast_Score=89, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=29.4372294372294, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=252, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=249, Percent_Identity=28.1124497991968, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=312, Percent_Identity=22.7564102564103, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=440, Percent_Identity=25.4545454545455, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24646207, Length=387, Percent_Identity=25.5813953488372, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24666513, Length=383, Percent_Identity=26.1096605744125, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI281363737, Length=447, Percent_Identity=24.1610738255034, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI21355753, Length=374, Percent_Identity=25.9358288770053, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24660351, Length=314, Percent_Identity=28.9808917197452, Blast_Score=95, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 65076; Mature: 64945

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQYVAPLRDMQFVLHELLNVEAELKQMPKHADLDADTINQVLEEAGKFCAEVLFPLNQV
CCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDREGCKYQGDGVVTTPTGFKDAYRQYIDAGWPALGCDPEYGGQGLPAFVNNALYEMMNS
CCCCCCEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
ANQAWTMYPGLSHGAYECLHAHGAPELQQQYLPKLVSGEWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHEEE
KAEPIGDGAYSISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDA
CCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
SGEPGERNGIKCGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCC
GMQGLGLTEVAYQNSLAYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECHHHHHHHHHHHHHHCC
ARAFTYWAALQIDKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGH
CHHHHHHHHHEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCC
GFISEWGMEQYVRDARINMIYEGTNSIQSLDLLGRKVLGDMGAKLKKFGAIVTEFVESEG
CCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKPEMAEFINPLADIGEKLQKLTMEIGMKAMQNPDEVGAAAVPYLRTAGHLVFAYFWARM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHH
ARLALDKEASGDPFYKSKLATARFYFARLLPETAATIRAARAGSKTLMEVDEALF
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
GQYVAPLRDMQFVLHELLNVEAELKQMPKHADLDADTINQVLEEAGKFCAEVLFPLNQV
CCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GDREGCKYQGDGVVTTPTGFKDAYRQYIDAGWPALGCDPEYGGQGLPAFVNNALYEMMNS
CCCCCCEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
ANQAWTMYPGLSHGAYECLHAHGAPELQQQYLPKLVSGEWTGTMCLTEPHCGTDLGILRT
CCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHEEE
KAEPIGDGAYSISGTKIFISSGEHDMSANIVHLVLARLPDAPQGTKGISLFIVPKFIPDA
CCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC
SGEPGERNGIKCGSIEHKMGIHGNATCVMNLDNAKGWLVGEPNKGLNAMFVMMNAARLGV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCC
GMQGLGLTEVAYQNSLAYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECHHHHHHHHHHHHHHCC
ARAFTYWAALQIDKELSHGDESVRKESADLVALLTPIIKAFLTDNAFECTNHAMQIYGGH
CHHHHHHHHHEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCC
GFISEWGMEQYVRDARINMIYEGTNSIQSLDLLGRKVLGDMGAKLKKFGAIVTEFVESEG
CCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKPEMAEFINPLADIGEKLQKLTMEIGMKAMQNPDEVGAAAVPYLRTAGHLVFAYFWARM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHH
ARLALDKEASGDPFYKSKLATARFYFARLLPETAATIRAARAGSKTLMEVDEALF
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]