| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028609
Identifier: 238028609
GI number: 238028609
Start: 3494284
End: 3494883
Strand: Reverse
Name: 238028609
Synonym: bglu_1g30730
Alternate gene names: NA
Gene position: 3494883-3494284 (Counterclockwise)
Preceding gene: 238028610
Following gene: 238028608
Centisome position: 89.46
GC content: 64.5
Gene sequence:
>600_bases ATGCGAAAAGGCGAACAAACGCGTGCCGCGATACTCGAAGCAGCTTTGGACCTTGCCAGCCGTGACGGGCTGGAGGGTCT GACGATCGGCCTGCTGGCCGAGCGCATGCAGATGAGCAAGAGCGGTGTGTTCGCACACTTCGGTTCACGCGAGGACCTCC AGGTGGAGGTTGTGCGAGAGTATCACCGCCGCTTCGAGAGCGAGGTGTTTTTTCCGAGCCTGCGCGAGCCGCGCGGCCTG CCGCGTCTGCGTGCGATGCTGGCCCGCTGGATCGAGAAGCGCATCCAGGAAGTGACGACCGGATGCATCTACATCAGCGG CGCCGTGGAGTACGACGACCGGCCCGACAGTCCGGTGCGCGAGCAACTGATCGCGAGCGTGACGGCCTGGCGCGCCGCGC TGCTGCGTGCGATTTCGCAGGCGAAGGACGAAGGCCATCTGCGTCCGGACACCGATCCGGACGTGATGCTCTTCGAGTTG TACAGCTTCACGCTCGGCCTGCATCACGACGCCCGCTTCCTGCATCTGCCGGACGGCGTGCGTCTGACCTGGGCCGCGCT GGAAAAGACGATCGTTTCGTATCAGAGCGAGAGCCGGTAG
Upstream 100 bases:
>100_bases GAATCTAATAATTTCCTTGTTCGACACACGGTCGCACTCAATAATAGTACGGCCGTTCGATTTTTTGGATTGCCTCTTGA ACGGTTTAGACATCAAGCTT
Downstream 100 bases:
>100_bases CGGTGCCGTGACGCCCGCGCGAGGCTCGAGCCAGTGCCCTACCTTTGGAGAGAGTCATGGGACAGTACGTTGCCCCGCTG CGCGACATGCAATTCGTGCT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHRRFESEVFFPSLREPRGL PRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVREQLIASVTAWRAALLRAISQAKDEGHLRPDTDPDVMLFEL YSFTLGLHHDARFLHLPDGVRLTWAALEKTIVSYQSESR
Sequences:
>Translated_199_residues MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHRRFESEVFFPSLREPRGL PRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVREQLIASVTAWRAALLRAISQAKDEGHLRPDTDPDVMLFEL YSFTLGLHHDARFLHLPDGVRLTWAALEKTIVSYQSESR >Mature_199_residues MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVREYHRRFESEVFFPSLREPRGL PRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVREQLIASVTAWRAALLRAISQAKDEGHLRPDTDPDVMLFEL YSFTLGLHHDARFLHLPDGVRLTWAALEKTIVSYQSESR
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22696; Mature: 22696
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVRE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH YHRRFESEVFFPSLREPRGLPRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVR HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECEEECCCCCCCHHH EQLIASVTAWRAALLRAISQAKDEGHLRPDTDPDVMLFELYSFTLGLHHDARFLHLPDGV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC RLTWAALEKTIVSYQSESR CHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKGEQTRAAILEAALDLASRDGLEGLTIGLLAERMQMSKSGVFAHFGSREDLQVEVVRE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH YHRRFESEVFFPSLREPRGLPRLRAMLARWIEKRIQEVTTGCIYISGAVEYDDRPDSPVR HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECEEECCCCCCCHHH EQLIASVTAWRAALLRAISQAKDEGHLRPDTDPDVMLFELYSFTLGLHHDARFLHLPDGV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC RLTWAALEKTIVSYQSESR CHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA