Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yieH [H]

Identifier: 238028580

GI number: 238028580

Start: 3458871

End: 3459557

Strand: Direct

Name: yieH [H]

Synonym: bglu_1g30440

Alternate gene names: 238028580

Gene position: 3458871-3459557 (Clockwise)

Preceding gene: 238028579

Following gene: 238028582

Centisome position: 88.54

GC content: 71.03

Gene sequence:

>687_bases
ATGCTCGACCATCTGATCTGCGACTGCGACGGCGTGCTCGTCGACAGTGAAGTGATCGCCGACCGCGTGCTGCTCGACGT
GCTCGGCGCCACGTTTCCCTCGCTCGATTTCAGCGCCGACGCGGCCGCCGCGTTCGGCCAGAAGACCTCGCTGTTTCTCG
CCTCGGTCGAGGCGCGCCACGGCATCCGCATGCCGGAAGGCTTCGTCGCCACCATCGATCGCGCCACCGAGGCCGAACTC
GCGCGCACGCTCGCGCCGATCGCGGGGGTGCGCGACGCGCTGCTGCGCATCCCGCTGCCGGCCGCCGTGGTATCCAACGC
ACGCGGCGAACGCGTGCGCAACTCGCTCGCGCGCGCCGCGCTCACCGACGTGTTCGGCGAACGCGTGTTCAGCGCCGACC
AGGTGGCGCGGCCGAAGCCCTACCCCGACGTCTATCTGCTCGCCGCGCGCACGCTCGGCGTCGAACCGGCGCGCTGCGTG
GTGGTGGAGGACAGCCTGTCGGGGCTGACCGCCGCGCGCGCGGCCGGCATGAAGACGATCGCGTTCGTCGGCGCGAGCCA
CATTCCGGATGGTTACGAGAGCGTGCTGCGCGCGACCGGCATCACGCGGATCGTGCGCAGCATGCGCGAATTGCCGGCGC
TCGTGGAGGCCGGCATGCGCGGCGAATTCGGCGACGTGCAATCGTAG

Upstream 100 bases:

>100_bases
GTGCCTGCGCGGCGCGCGCGGGCTGCCCGGGCCGCGCCGCGAAAGCACGTATGATGGCGATTCGCCCAACTCAGCGATTG
TCCGCGCCCTGCCGCTTGCC

Downstream 100 bases:

>100_bases
CGGCAGCCCGCCCGGCGGCGCGAACCGCCGCCCGCCCTATTGCGGCAGATCCCAGCGCGGCGGCACTTCCGCGTTGATCG
TGACGCGGAACGCGCGCGCC

Product: HAD-superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARHGIRMPEGFVATIDRATEAEL
ARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAALTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCV
VVEDSLSGLTAARAAGMKTIAFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS

Sequences:

>Translated_228_residues
MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARHGIRMPEGFVATIDRATEAEL
ARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAALTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCV
VVEDSLSGLTAARAAGMKTIAFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS
>Mature_228_residues
MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARHGIRMPEGFVATIDRATEAEL
ARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAALTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCV
VVEDSLSGLTAARAAGMKTIAFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1790151, Length=185, Percent_Identity=29.7297297297297, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789046, Length=179, Percent_Identity=30.7262569832402, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788021, Length=182, Percent_Identity=32.4175824175824, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI20129151, Length=227, Percent_Identity=29.0748898678414, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24161; Mature: 24161

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARH
CCCCEEECCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHC
GIRMPEGFVATIDRATEAELARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH
LTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCVVVEDSLSGLTAARAAGMKTI
HHHHHHHHHHCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHCCHHH
AFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLDHLICDCDGVLVDSEVIADRVLLDVLGATFPSLDFSADAAAAFGQKTSLFLASVEARH
CCCCEEECCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHC
GIRMPEGFVATIDRATEAELARTLAPIAGVRDALLRIPLPAAVVSNARGERVRNSLARAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH
LTDVFGERVFSADQVARPKPYPDVYLLAARTLGVEPARCVVVEDSLSGLTAARAAGMKTI
HHHHHHHHHHCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHCCHHH
AFVGASHIPDGYESVLRATGITRIVRSMRELPALVEAGMRGEFGDVQS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]