Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028538

Identifier: 238028538

GI number: 238028538

Start: 3400645

End: 3403377

Strand: Direct

Name: 238028538

Synonym: bglu_1g30020

Alternate gene names: NA

Gene position: 3400645-3403377 (Clockwise)

Preceding gene: 238028536

Following gene: 238028539

Centisome position: 87.05

GC content: 69.01

Gene sequence:

>2733_bases
GTGACGCGTGCGCAGTGTCTCGGCCGGTGGTGGCTGCTCGTTTGCGCGATCAATGCACCCGCTCAGGCGCTCGCCGAACC
GGCCCCCGCGCACGGCGCAGTGCCGCCGGCGGTGCAGCCGTTCGCGGCCACCGCCAGCCGCCCGAATCTGGCATTCTTCT
TCGGCGCGAATCCGCCCGTCGACGCATTGCAGGCCTTCGACGCGGTGGTCGTCGATGCCTCGCGCGGTTTCGATCCGCAG
GCCCATCCGCTCGCGCACACGCTGTGGATGGCGCGCACCACGGCCGAGGCCGGGCAAACTCCGGCGCAGTTCGTCGCCCA
GGCCATCGAGCCGCTGTGGCAGCGCGGCTATCGCGGCTTTTTGCTCGACTCGCCGGAGGCGCTCGCCGCCGTCGCCGCGA
TCCACGCGGCACACCCCGATGCACGGCTCATCGCCGGCGGCCCCGATGCGCTGCGGGCCGCCATGCCGCTCGCGCGCGAA
CTCTACGCGGTGGTCGGCGAATCGCTGGTGCGCGGCCTGGACGCGCCCGGTACGCTCCCGCTCGATGTGCCGCCGGCGTT
GCGCGACAGCCGCGCGGCGGCCGCCCGTGCGTTCACCGCGCAAACCGGGGTGCCGGTGGTGTCGATCGAATACTGCGCGC
GCACCGATCGCAACTGCGCGCGCCAGACCGCCGAAACGGTGCTGCAGCTTGGCGTCGAGCCGTACGTGACGAACCCCGCG
CGCGACGTCGTCGGGATCGGCGCAATCGAGGTGCTGCCGCGCAAGATTCTCGTGGTGCAGGATCACAACCCGAAGCAGCC
GCTCGACGGCAGCATCGGCGTGCGCGATCTCGCCACGCCGCTGAATTATCTCGGCTACGACGTGCAATACGCGGATTTTG
CGTCGGGCCTGCCCGACGACATCACGCCCGACCGATACGCGGGCGTGGTCGTGTGGCTGCAAGGCACGGGCGTGCCGAAC
ACGCGCGCCTGGGAACGCTGGGTCGCCGCGCGCATCGTCGATCATGTGCCGGTGGCGTTCCTCGACCAGTTCGGCTTCGA
TCCATCCGGCCCGCTTGCGGCCGGACTGGGCCTGCAAACGGTGCAGGGGCCGTTCTCGGGGCCGGTGAACGTGATCGCGC
GCGATCCGATGATCGGTTTCGAAATCAATCCTCGCAACGATCCGCGCGACTTGCTCGGCGTGCGCGTCGGCGAGACGGGG
CACGCGCTGCTGCGCCTGAGCGTGAACGGCGGCGAGCTGGACCCGGTGGCGATCCTGCCATGGGGCGGCTACGCGCTCGC
GCCGTACACGGTGGTGTCGCTCGACGGCGTTCAGATGGAGCGCTGGGCGATCCAGCCGATGCGGTTCCTGACTGCGGCGC
TGCGCTTGCCGGCGCTGCCGTCGCCGAGCGTGACCACCGAAAACGGCCGTCGGCTGCTCATGACGCACGTTGACGGTGAC
GGCTTCGCGTCGCGCACCGAGTTTCCCGGCCCGGACTATTCGGGCGAAGCGCTCTACGAGCAGATCTTCTCGCACTACAA
GATCCCGATGACGCTGTCGGTGATCGAGGGCGAGGTCGGCCCGGCGGGCTTGTATCCGAAGATTTCGCCGCGGCTCGAAG
AGATCGCGCGCAAGATGTTCGCGCTGCCGTGGGTCGAGATCGGCACGCATACCTACTCGCACCCGTTCCAGTGGGAAGAC
GTGGACGGCAGCACCGGCGCGAAGGTCGATCGCGGCGGCGGCGATGCAGCGTTCTCGCTGAACATTCCGGGCTACAAGTT
CAACATCGACCGCGAGATTTCCGGCTCGATCGACTACATCAACGCGAAGCTCGCGCCGCCGGGCAAAAAGGTGGTGGTGC
TGCAATGGTCGGGCGACTGTCAGCCGCCCGGCATCGTTGTGCGCAAGGTCTACGAGGCCGGCGTCTACAACTTCAACGGC
GGCGATACGGTGATCACGCGCTCGCAGCCGACCTGGACGGCGATCGCGCCGATCGGCGTCGACAAGGGGCCGAACGCCTA
TCAGGTCTACGCGCCCAACCAGGACGAAAATGTTTATACCAACGACTGGCAAGGCCCGTTCTACGGCTTCGACCGCGTGC
TTGAAACCTTCGCCATGACCGAGAGCCCGCTGCGCTTCAAGCCGATCGACATCTACTACCACATGTACAGCGGCACCAAG
CTGGCGTCGCTGCGTTCGCTCGACAAGATCTACTCGGCGGTGCTGAAGCAGCCGCTGCTGCCGGTGCACGTGACCGACTA
CATCCGCAAGGTGCTCGACTGGCGCACGTTCGCGGTGGCGCGTCAGACCGGCACGCGCGACGGCTGGGTGGTGCGCGGCA
ACGGCGCGGTGCGCGAGCTGCATTGGGCCGGCAGCGAGGTGCCCGACCTCACGCAGGCTTTCGGCGTGACCGGCTACGCG
CCCGGCCCCGACGGCAACTACCTTCATATCGACGGCGGCGCCGCGCGCTTCACGCTCGCGCCCGCTTCCGGCGCCGCGCC
GCAGCGCCCGTACATCGCGCAGGCCAACGGTTTCGTGCGCCGCTTCCGGGTGACGCCGCACGGCCTGGCATTCGAATTCG
GCGGCTACTACCAGCCGTTCGTCGAGCTGGCGAACGCGCAGCGCTGCCGCGCGCGCGTGGCCGGCCAGCCGGTCGCGACG
CGCGCCGACGGCGCGCTGCTACGGTTCGACACGACGGGCGTGGCCGGCGCGCGCGTCACCTATCAACCCGTCGAGATCGA
TTGTGACCGCTAG

Upstream 100 bases:

>100_bases
TGCGCGGTGCACTCCGAAGACCCGCATGCGAAACCAAACCAATCTGTCAGGCACTGCATCGCGCGCACCCCGGCGACAGT
GGAACGCGCTACGCCGCATC

Downstream 100 bases:

>100_bases
TCGTCCGCGCATCGCCCCGCCCTGGCTCGTGCTGCTGCTTGCGTTGGGGGTGGTCGTGATCCTCTATACGGCATGGCCGC
GCGAAGCGCTGCGCGAGCGG

Product: putative polysaccharide transport system component signal peptide protein (ragA)

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Polysaccharide Transport System Component Protein

Number of amino acids: Translated: 910; Mature: 909

Protein sequence:

>910_residues
MTRAQCLGRWWLLVCAINAPAQALAEPAPAHGAVPPAVQPFAATASRPNLAFFFGANPPVDALQAFDAVVVDASRGFDPQ
AHPLAHTLWMARTTAEAGQTPAQFVAQAIEPLWQRGYRGFLLDSPEALAAVAAIHAAHPDARLIAGGPDALRAAMPLARE
LYAVVGESLVRGLDAPGTLPLDVPPALRDSRAAAARAFTAQTGVPVVSIEYCARTDRNCARQTAETVLQLGVEPYVTNPA
RDVVGIGAIEVLPRKILVVQDHNPKQPLDGSIGVRDLATPLNYLGYDVQYADFASGLPDDITPDRYAGVVVWLQGTGVPN
TRAWERWVAARIVDHVPVAFLDQFGFDPSGPLAAGLGLQTVQGPFSGPVNVIARDPMIGFEINPRNDPRDLLGVRVGETG
HALLRLSVNGGELDPVAILPWGGYALAPYTVVSLDGVQMERWAIQPMRFLTAALRLPALPSPSVTTENGRRLLMTHVDGD
GFASRTEFPGPDYSGEALYEQIFSHYKIPMTLSVIEGEVGPAGLYPKISPRLEEIARKMFALPWVEIGTHTYSHPFQWED
VDGSTGAKVDRGGGDAAFSLNIPGYKFNIDREISGSIDYINAKLAPPGKKVVVLQWSGDCQPPGIVVRKVYEAGVYNFNG
GDTVITRSQPTWTAIAPIGVDKGPNAYQVYAPNQDENVYTNDWQGPFYGFDRVLETFAMTESPLRFKPIDIYYHMYSGTK
LASLRSLDKIYSAVLKQPLLPVHVTDYIRKVLDWRTFAVARQTGTRDGWVVRGNGAVRELHWAGSEVPDLTQAFGVTGYA
PGPDGNYLHIDGGAARFTLAPASGAAPQRPYIAQANGFVRRFRVTPHGLAFEFGGYYQPFVELANAQRCRARVAGQPVAT
RADGALLRFDTTGVAGARVTYQPVEIDCDR

Sequences:

>Translated_910_residues
MTRAQCLGRWWLLVCAINAPAQALAEPAPAHGAVPPAVQPFAATASRPNLAFFFGANPPVDALQAFDAVVVDASRGFDPQ
AHPLAHTLWMARTTAEAGQTPAQFVAQAIEPLWQRGYRGFLLDSPEALAAVAAIHAAHPDARLIAGGPDALRAAMPLARE
LYAVVGESLVRGLDAPGTLPLDVPPALRDSRAAAARAFTAQTGVPVVSIEYCARTDRNCARQTAETVLQLGVEPYVTNPA
RDVVGIGAIEVLPRKILVVQDHNPKQPLDGSIGVRDLATPLNYLGYDVQYADFASGLPDDITPDRYAGVVVWLQGTGVPN
TRAWERWVAARIVDHVPVAFLDQFGFDPSGPLAAGLGLQTVQGPFSGPVNVIARDPMIGFEINPRNDPRDLLGVRVGETG
HALLRLSVNGGELDPVAILPWGGYALAPYTVVSLDGVQMERWAIQPMRFLTAALRLPALPSPSVTTENGRRLLMTHVDGD
GFASRTEFPGPDYSGEALYEQIFSHYKIPMTLSVIEGEVGPAGLYPKISPRLEEIARKMFALPWVEIGTHTYSHPFQWED
VDGSTGAKVDRGGGDAAFSLNIPGYKFNIDREISGSIDYINAKLAPPGKKVVVLQWSGDCQPPGIVVRKVYEAGVYNFNG
GDTVITRSQPTWTAIAPIGVDKGPNAYQVYAPNQDENVYTNDWQGPFYGFDRVLETFAMTESPLRFKPIDIYYHMYSGTK
LASLRSLDKIYSAVLKQPLLPVHVTDYIRKVLDWRTFAVARQTGTRDGWVVRGNGAVRELHWAGSEVPDLTQAFGVTGYA
PGPDGNYLHIDGGAARFTLAPASGAAPQRPYIAQANGFVRRFRVTPHGLAFEFGGYYQPFVELANAQRCRARVAGQPVAT
RADGALLRFDTTGVAGARVTYQPVEIDCDR
>Mature_909_residues
TRAQCLGRWWLLVCAINAPAQALAEPAPAHGAVPPAVQPFAATASRPNLAFFFGANPPVDALQAFDAVVVDASRGFDPQA
HPLAHTLWMARTTAEAGQTPAQFVAQAIEPLWQRGYRGFLLDSPEALAAVAAIHAAHPDARLIAGGPDALRAAMPLAREL
YAVVGESLVRGLDAPGTLPLDVPPALRDSRAAAARAFTAQTGVPVVSIEYCARTDRNCARQTAETVLQLGVEPYVTNPAR
DVVGIGAIEVLPRKILVVQDHNPKQPLDGSIGVRDLATPLNYLGYDVQYADFASGLPDDITPDRYAGVVVWLQGTGVPNT
RAWERWVAARIVDHVPVAFLDQFGFDPSGPLAAGLGLQTVQGPFSGPVNVIARDPMIGFEINPRNDPRDLLGVRVGETGH
ALLRLSVNGGELDPVAILPWGGYALAPYTVVSLDGVQMERWAIQPMRFLTAALRLPALPSPSVTTENGRRLLMTHVDGDG
FASRTEFPGPDYSGEALYEQIFSHYKIPMTLSVIEGEVGPAGLYPKISPRLEEIARKMFALPWVEIGTHTYSHPFQWEDV
DGSTGAKVDRGGGDAAFSLNIPGYKFNIDREISGSIDYINAKLAPPGKKVVVLQWSGDCQPPGIVVRKVYEAGVYNFNGG
DTVITRSQPTWTAIAPIGVDKGPNAYQVYAPNQDENVYTNDWQGPFYGFDRVLETFAMTESPLRFKPIDIYYHMYSGTKL
ASLRSLDKIYSAVLKQPLLPVHVTDYIRKVLDWRTFAVARQTGTRDGWVVRGNGAVRELHWAGSEVPDLTQAFGVTGYAP
GPDGNYLHIDGGAARFTLAPASGAAPQRPYIAQANGFVRRFRVTPHGLAFEFGGYYQPFVELANAQRCRARVAGQPVATR
ADGALLRFDTTGVAGARVTYQPVEIDCDR

Specific function: Unknown

COG id: COG3868

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98465; Mature: 98333

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAQCLGRWWLLVCAINAPAQALAEPAPAHGAVPPAVQPFAATASRPNLAFFFGANPPV
CCHHHHHHHEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCH
DALQAFDAVVVDASRGFDPQAHPLAHTLWMARTTAEAGQTPAQFVAQAIEPLWQRGYRGF
HHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCE
LLDSPEALAAVAAIHAAHPDARLIAGGPDALRAAMPLARELYAVVGESLVRGLDAPGTLP
EECCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LDVPPALRDSRAAAARAFTAQTGVPVVSIEYCARTDRNCARQTAETVLQLGVEPYVTNPA
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCH
RDVVGIGAIEVLPRKILVVQDHNPKQPLDGSIGVRDLATPLNYLGYDVQYADFASGLPDD
HHHHCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCC
ITPDRYAGVVVWLQGTGVPNTRAWERWVAARIVDHVPVAFLDQFGFDPSGPLAAGLGLQT
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCCCCC
VQGPFSGPVNVIARDPMIGFEINPRNDPRDLLGVRVGETGHALLRLSVNGGELDPVAILP
CCCCCCCCCEEEECCCEEEEEECCCCCCHHHHEEEECCCCCEEEEEEECCCCCCCEEEEE
WGGYALAPYTVVSLDGVQMERWAIQPMRFLTAALRLPALPSPSVTTENGRRLLMTHVDGD
CCCEEECCEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
GFASRTEFPGPDYSGEALYEQIFSHYKIPMTLSVIEGEVGPAGLYPKISPRLEEIARKMF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
ALPWVEIGTHTYSHPFQWEDVDGSTGAKVDRGGGDAAFSLNIPGYKFNIDREISGSIDYI
HCCCEEECCCCCCCCEEECCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCCCEEEE
NAKLAPPGKKVVVLQWSGDCQPPGIVVRKVYEAGVYNFNGGDTVITRSQPTWTAIAPIGV
EEEECCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCCEEEEEEECC
DKGPNAYQVYAPNQDENVYTNDWQGPFYGFDRVLETFAMTESPLRFKPIDIYYHMYSGTK
CCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCH
LASLRSLDKIYSAVLKQPLLPVHVTDYIRKVLDWRTFAVARQTGTRDGWVVRGNGAVREL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCEEEE
HWAGSEVPDLTQAFGVTGYAPGPDGNYLHIDGGAARFTLAPASGAAPQRPYIAQANGFVR
ECCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEEECCCCEEE
RFRVTPHGLAFEFGGYYQPFVELANAQRCRARVAGQPVATRADGALLRFDTTGVAGARVT
EEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEE
YQPVEIDCDR
EEEEEEECCC
>Mature Secondary Structure 
TRAQCLGRWWLLVCAINAPAQALAEPAPAHGAVPPAVQPFAATASRPNLAFFFGANPPV
CHHHHHHHEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCH
DALQAFDAVVVDASRGFDPQAHPLAHTLWMARTTAEAGQTPAQFVAQAIEPLWQRGYRGF
HHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCE
LLDSPEALAAVAAIHAAHPDARLIAGGPDALRAAMPLARELYAVVGESLVRGLDAPGTLP
EECCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LDVPPALRDSRAAAARAFTAQTGVPVVSIEYCARTDRNCARQTAETVLQLGVEPYVTNPA
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCH
RDVVGIGAIEVLPRKILVVQDHNPKQPLDGSIGVRDLATPLNYLGYDVQYADFASGLPDD
HHHHCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCC
ITPDRYAGVVVWLQGTGVPNTRAWERWVAARIVDHVPVAFLDQFGFDPSGPLAAGLGLQT
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCCCCC
VQGPFSGPVNVIARDPMIGFEINPRNDPRDLLGVRVGETGHALLRLSVNGGELDPVAILP
CCCCCCCCCEEEECCCEEEEEECCCCCCHHHHEEEECCCCCEEEEEEECCCCCCCEEEEE
WGGYALAPYTVVSLDGVQMERWAIQPMRFLTAALRLPALPSPSVTTENGRRLLMTHVDGD
CCCEEECCEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
GFASRTEFPGPDYSGEALYEQIFSHYKIPMTLSVIEGEVGPAGLYPKISPRLEEIARKMF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
ALPWVEIGTHTYSHPFQWEDVDGSTGAKVDRGGGDAAFSLNIPGYKFNIDREISGSIDYI
HCCCEEECCCCCCCCEEECCCCCCCCCEEECCCCCEEEEEECCCEEEEECCCCCCCEEEE
NAKLAPPGKKVVVLQWSGDCQPPGIVVRKVYEAGVYNFNGGDTVITRSQPTWTAIAPIGV
EEEECCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCCEEEEEEECC
DKGPNAYQVYAPNQDENVYTNDWQGPFYGFDRVLETFAMTESPLRFKPIDIYYHMYSGTK
CCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCH
LASLRSLDKIYSAVLKQPLLPVHVTDYIRKVLDWRTFAVARQTGTRDGWVVRGNGAVREL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCEEEE
HWAGSEVPDLTQAFGVTGYAPGPDGNYLHIDGGAARFTLAPASGAAPQRPYIAQANGFVR
ECCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEEECCCCEEE
RFRVTPHGLAFEFGGYYQPFVELANAQRCRARVAGQPVATRADGALLRFDTTGVAGARVT
EEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEE
YQPVEIDCDR
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA