| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is proP [H]
Identifier: 238028536
GI number: 238028536
Start: 3396884
End: 3398542
Strand: Direct
Name: proP [H]
Synonym: bglu_1g30000
Alternate gene names: 238028536
Gene position: 3396884-3398542 (Clockwise)
Preceding gene: 238028535
Following gene: 238028538
Centisome position: 86.95
GC content: 65.76
Gene sequence:
>1659_bases ATGGCGACAGTAGGCGAACACATCGCGCATTCGCCGATGACGAGTGACGAGAAGCGGGTGATCTTCGCGTCGTCGCTCGG CACCGTGTTCGAGTGGTACGACTTTTATCTGGCCGGCTCGCTCGCGGCCTACATCAGCAAGAGCTTCTTTTCCGGCGTCA ACCCGACCGCCGCGTTCATCTTCACGCTGCTCGGGTTCGCTGCCGGCTTCGCCGTGCGCCCGTTCGGCGCGATCGTGTTC GGCCGGCTCGGCGACATGGTCGGGCGCAAGTACACGTTCCTGATGACCATCGTGATCATGGGGCTGTCGACCTTCGTGGT GGGCTTCCTGCCCGGCTACGCGTCGATCGGCATTGCCGCGCCGGTGATCTTCATCGTGATGCGGCTGCTGCAGGGGCTCG CGCTGGGCGGCGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCACGCGCCGTCGAACCGGCGCGGCTTCTATACCGCG TGGATCCAGACCACCGCCACGCTGGGCCTGTTCCTGTCGCTGCTGGTGATTCTCGGCGTGCGCCTGGCGCTCGGCGAGGA CGCGTTCGCCGCCTGGGCATGGCGCATCCCGTTCGTCGCCTCGATCCTGCTGCTCGGCGTGTCGGTATGGATTCGGCTGC AACTCGACGAATCGCCGGTGTTCCTGCGCATCAAGGCCGAGGGCAAGACCTCGAAGGCGCCGCTGACCGAGGCGTTCGGC CAGTGGAAGAACCTGAAGATCGTGATCCTCGCGCTGGTCGGGCTGACCGCCGGGCAGGCCGTGGTCTGGTACACGGGCCA GTTCTACGCGCTGTTCTTCCTGACCCAGACGCTGAAGGTGGACGGCAGCAGCGCCAACATCCTGATCGCCATCGCGCTCC TGATCGGCACACCGTTCTTCCTGTTCTTCGGCTCGCTGTCGGACCGCATCGGCCGCAAGCCGATCATCCTGGCCGGCTGC CTGATCGCCGCGCTCTCCTACTTCCCGCTGTTCAAGGCGCTCACGCACTACACGAACCCGGCGCTGGAGACCGCAACGCA GAAGGCGCCGATCAGCGTGATCGCGAACCCGGACGAATGCTCGTTCCAGTTCAACCCGGTGGGCACGGCGAAGTTCACGA ACTCGTGCGACGTGGCGAAGGCGGCGCTGGCGAAGGCCGGGCTCAACTACGACAACGTGGCCGCGCCGGCCGGCACGCTG GCGCAGATCAAGGTGGGCGAGACGGTGATCGACACCTATGACGGCAAGGCCGCCGACGCCAAGCTGAAGGCCGCCGCGTT CGACAAGACGCTGGCCGCGACGCTGAAGGGCGCCGGCTACCCGGCGAAGGCCGACCCGTCGCAGATCAACTGGCCGATGG CGATCGTGGTGCTGACGATCCTCGTGATCTTCGTGACGATGGTGTACGGGCCGATCGCGGCGATGCTGGTGGAGATGTTC CCGACGCGGATCCGCTACACGTCGATGTCGCTGCCCTATCACATCGGCAACGGCTGGTTCGGCGGCTTCCTGCCGGCCAC GGCGTTCGCGATCGTGGCCGCCAAGGGCAACATCTACTCGGGGCTCTGGTATCCGATCACGATCGCGCTGGTGACGTTCG TGATCGGGCTGCTGTTCGTGAAGGAGACGAAGGGGTCGAACATCTACTCGCAGGATTGA
Upstream 100 bases:
>100_bases GCCGCACCAGTCAGTAGGCCGTAAGTTTGCCCGCCAATAATCGTCGCCAGTTCGTCAGGATGGCGAACCGACATATCGAC ATCAAGATTGGAGACGACTC
Downstream 100 bases:
>100_bases GGCGAGCGGGCGGGGCGGTGGCGCCTAGCTGAAAAAATTCGAGGAAAGTGTTGACACTGCCACGATCTTTCCTCATAATC CGTCTTCTGTTGGCGAATTA
Product: major facilitator family transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MATVGEHIAHSPMTSDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDMVGRKYTFLMTIVIMGLSTFVVGFLPGYASIGIAAPVIFIVMRLLQGLALGGEYGGAATYVAEHAPSNRRGFYTA WIQTTATLGLFLSLLVILGVRLALGEDAFAAWAWRIPFVASILLLGVSVWIRLQLDESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGSSANILIAIALLIGTPFFLFFGSLSDRIGRKPIILAGC LIAALSYFPLFKALTHYTNPALETATQKAPISVIANPDECSFQFNPVGTAKFTNSCDVAKAALAKAGLNYDNVAAPAGTL AQIKVGETVIDTYDGKAADAKLKAAAFDKTLAATLKGAGYPAKADPSQINWPMAIVVLTILVIFVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPITIALVTFVIGLLFVKETKGSNIYSQD
Sequences:
>Translated_552_residues MATVGEHIAHSPMTSDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDMVGRKYTFLMTIVIMGLSTFVVGFLPGYASIGIAAPVIFIVMRLLQGLALGGEYGGAATYVAEHAPSNRRGFYTA WIQTTATLGLFLSLLVILGVRLALGEDAFAAWAWRIPFVASILLLGVSVWIRLQLDESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGSSANILIAIALLIGTPFFLFFGSLSDRIGRKPIILAGC LIAALSYFPLFKALTHYTNPALETATQKAPISVIANPDECSFQFNPVGTAKFTNSCDVAKAALAKAGLNYDNVAAPAGTL AQIKVGETVIDTYDGKAADAKLKAAAFDKTLAATLKGAGYPAKADPSQINWPMAIVVLTILVIFVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPITIALVTFVIGLLFVKETKGSNIYSQD >Mature_551_residues ATVGEHIAHSPMTSDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVFG RLGDMVGRKYTFLMTIVIMGLSTFVVGFLPGYASIGIAAPVIFIVMRLLQGLALGGEYGGAATYVAEHAPSNRRGFYTAW IQTTATLGLFLSLLVILGVRLALGEDAFAAWAWRIPFVASILLLGVSVWIRLQLDESPVFLRIKAEGKTSKAPLTEAFGQ WKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGSSANILIAIALLIGTPFFLFFGSLSDRIGRKPIILAGCL IAALSYFPLFKALTHYTNPALETATQKAPISVIANPDECSFQFNPVGTAKFTNSCDVAKAALAKAGLNYDNVAAPAGTLA QIKVGETVIDTYDGKAADAKLKAAAFDKTLAATLKGAGYPAKADPSQINWPMAIVVLTILVIFVTMVYGPIAAMLVEMFP TRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPITIALVTFVIGLLFVKETKGSNIYSQD
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=315, Percent_Identity=34.2857142857143, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1788292, Length=328, Percent_Identity=35.0609756097561, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1788942, Length=339, Percent_Identity=35.3982300884956, Blast_Score=172, Evalue=6e-44, Organism=Escherichia coli, GI1789941, Length=220, Percent_Identity=41.3636363636364, Blast_Score=146, Evalue=4e-36, Organism=Escherichia coli, GI87082231, Length=236, Percent_Identity=26.271186440678, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI87082404, Length=325, Percent_Identity=24.3076923076923, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59196; Mature: 59065
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVGEHIAHSPMTSDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDMVGRKYTFLMTIVIMGLSTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIVMRLLQGLALGGEYGGAATYVAEHAPSNRRGFYTAWIQTTATLGLFLSLLVILGV HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH RLALGEDAFAAWAWRIPFVASILLLGVSVWIRLQLDESPVFLRIKAEGKTSKAPLTEAFG HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGSSANILIAIALLIGTPFF CCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH LFFGSLSDRIGRKPIILAGCLIAALSYFPLFKALTHYTNPALETATQKAPISVIANPDEC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCC SFQFNPVGTAKFTNSCDVAKAALAKAGLNYDNVAAPAGTLAQIKVGETVIDTYDGKAADA CEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCC KLKAAAFDKTLAATLKGAGYPAKADPSQINWPMAIVVLTILVIFVTMVYGPIAAMLVEMF HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPITIALVTFVIGLLFV HHHEEEEEECCCEEECCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHH KETKGSNIYSQD CCCCCCCCCCCC >Mature Secondary Structure ATVGEHIAHSPMTSDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDMVGRKYTFLMTIVIMGLSTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIVMRLLQGLALGGEYGGAATYVAEHAPSNRRGFYTAWIQTTATLGLFLSLLVILGV HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH RLALGEDAFAAWAWRIPFVASILLLGVSVWIRLQLDESPVFLRIKAEGKTSKAPLTEAFG HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALVGLTAGQAVVWYTGQFYALFFLTQTLKVDGSSANILIAIALLIGTPFF CCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH LFFGSLSDRIGRKPIILAGCLIAALSYFPLFKALTHYTNPALETATQKAPISVIANPDEC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCC SFQFNPVGTAKFTNSCDVAKAALAKAGLNYDNVAAPAGTLAQIKVGETVIDTYDGKAADA CEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCC KLKAAAFDKTLAATLKGAGYPAKADPSQINWPMAIVVLTILVIFVTMVYGPIAAMLVEMF HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAAKGNIYSGLWYPITIALVTFVIGLLFV HHHEEEEEECCCEEECCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHH KETKGSNIYSQD CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]