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The map label for this gene is ygfU [H]

Identifier: 238028495

GI number: 238028495

Start: 3348274

End: 3349647

Strand: Direct

Name: ygfU [H]

Synonym: bglu_1g29590

Alternate gene names: 238028495

Gene position: 3348274-3349647 (Clockwise)

Preceding gene: 238028492

Following gene: 238028499

Centisome position: 85.71

GC content: 67.54

Gene sequence:

>1374_bases
ATGCAATCGAACACGGTCCATCCGTGCGACGAGATTTTGCCGGCCGGCAGGCTCGTCACCCTCGGTCTGCAGCACGTGCT
CGTGATGTACGCCGGCGCGGTCGCGGTGCCGCTCATCATCGGCGGCGCGCTGAAGCTGCCGAAAGACCAGATCGCGTTCC
TGATCAGCGCCGACCTGTTCGCGTGCGGAATCGCCACGCTGATCCAGACGCTCGGCGTCTGGATCTTCGGCATCCGTCTG
CCGGTGATCATGGGCTGCACCTTCGCCTCGGTCGGCCCGCTGATCGCGATCGGCACCAATCCGAGCCTCGGGCTGCTCGA
CGTATTCGGCTCGACCATCGCGGCGGGCGTGATCGGCATCGTGATCGCGCCGGTGATCGGCAAGCTGTTGCGCTTCTTTC
CGCCGGTGGTGGTCGGCACCGTGATCGCGGTGATCGGCCTGTCGCTGATGGGGGTGGGCATCAACTGGGCCGCCGGCGGC
GTGGGCAACCCCGAGTACGGCGACCCGGTGTTCCTCGGCCTGTCGCTGCTGGTGCTCACGCTGATCCTGCTGATCAACAG
GTTCGGCCGCGGCTTCCTTGCCAACATCGCGGTGCTGCTGGGCATCGTGGCCGGCTTCGCGATCGCGCTCGGGCTCGGGC
GCGTCGATCTCGACGGCGTCGCGGCCGCGCCCTGGGTCGGCGTCGTGATGCCGTTCCACTTCGGCGTGCCGCACTTCGAC
GCGCTGTCGATCGCGACCATGGTGATCGTGATGTTCGTCACCTTCATCGAATCGACCGGCATGTTCCTCGCGGTCGGCGA
CATGGTCGAGCGCCCGGTGGACCAGCAGGCCCTGGTGCGCGGCCTGCGCGTGGACGGCCTCGGCACGCTGATCGGCGGCA
TCTTCAACTCGTTTCCGCACACCTCGTTCTCGCAGAACGTCGGGCTGGTGGGCGTGACCGGCGTGAAGAGCCGCTTCGTG
TGCGTGACGGGCGGCGTGATCCTGGTGCTGCTCGGGCTGTTCCCGAAGATGGCGCAGATCGTCGCCTCGGTGCCGGCCTT
CGTGCTGGGCGGCGCGGGCATCGTGATGTTCGGAATGGTGGCCGCGAACGGCGTGAAAACGCTTTCACGCGTCGATTTCG
TCACCAATCACAACAACCTGTTCATCGTCGCGGTCAGCATCGGGCTAGGCCTCGTGCCGGTGGTCTCGCCGCACTTCTTC
GCGAAGCTGCCGGGCGCGCTCGCCCCGCTCCTGCACAGCGGCATCCTGCTCGCCTCGGTGTCGGCAGTGCTGCTGAACCT
CGTGTTCAACGGCGTGAGGAGCGAGCAGCAGGCCGAATGCGAGATCCGCCGCGCCGGCCACGACCTCGAACGGCGCCCGG
CCGGCCTGCACTGA

Upstream 100 bases:

>100_bases
CCGCCCGCAAACCGTGGAATAGCGTCCAATGCTCTTGTTGGCCTGCTGCGATGCGCATAACTTCACACCACCCCGACAAC
AAGATCATGGAGTGAGACAG

Downstream 100 bases:

>100_bases
GCGCACGACGCGGGCGCGCCGCGCGGCGCGCCGCGCGGCGCGCCCGCGGCGCTGAGGCAACGCCCGGCCGCGTTCGGGTG
TGGCGCGTTGCGGCGCAGAA

Product: Uracil-xanthine permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MQSNTVHPCDEILPAGRLVTLGLQHVLVMYAGAVAVPLIIGGALKLPKDQIAFLISADLFACGIATLIQTLGVWIFGIRL
PVIMGCTFASVGPLIAIGTNPSLGLLDVFGSTIAAGVIGIVIAPVIGKLLRFFPPVVVGTVIAVIGLSLMGVGINWAAGG
VGNPEYGDPVFLGLSLLVLTLILLINRFGRGFLANIAVLLGIVAGFAIALGLGRVDLDGVAAAPWVGVVMPFHFGVPHFD
ALSIATMVIVMFVTFIESTGMFLAVGDMVERPVDQQALVRGLRVDGLGTLIGGIFNSFPHTSFSQNVGLVGVTGVKSRFV
CVTGGVILVLLGLFPKMAQIVASVPAFVLGGAGIVMFGMVAANGVKTLSRVDFVTNHNNLFIVAVSIGLGLVPVVSPHFF
AKLPGALAPLLHSGILLASVSAVLLNLVFNGVRSEQQAECEIRRAGHDLERRPAGLH

Sequences:

>Translated_457_residues
MQSNTVHPCDEILPAGRLVTLGLQHVLVMYAGAVAVPLIIGGALKLPKDQIAFLISADLFACGIATLIQTLGVWIFGIRL
PVIMGCTFASVGPLIAIGTNPSLGLLDVFGSTIAAGVIGIVIAPVIGKLLRFFPPVVVGTVIAVIGLSLMGVGINWAAGG
VGNPEYGDPVFLGLSLLVLTLILLINRFGRGFLANIAVLLGIVAGFAIALGLGRVDLDGVAAAPWVGVVMPFHFGVPHFD
ALSIATMVIVMFVTFIESTGMFLAVGDMVERPVDQQALVRGLRVDGLGTLIGGIFNSFPHTSFSQNVGLVGVTGVKSRFV
CVTGGVILVLLGLFPKMAQIVASVPAFVLGGAGIVMFGMVAANGVKTLSRVDFVTNHNNLFIVAVSIGLGLVPVVSPHFF
AKLPGALAPLLHSGILLASVSAVLLNLVFNGVRSEQQAECEIRRAGHDLERRPAGLH
>Mature_457_residues
MQSNTVHPCDEILPAGRLVTLGLQHVLVMYAGAVAVPLIIGGALKLPKDQIAFLISADLFACGIATLIQTLGVWIFGIRL
PVIMGCTFASVGPLIAIGTNPSLGLLDVFGSTIAAGVIGIVIAPVIGKLLRFFPPVVVGTVIAVIGLSLMGVGINWAAGG
VGNPEYGDPVFLGLSLLVLTLILLINRFGRGFLANIAVLLGIVAGFAIALGLGRVDLDGVAAAPWVGVVMPFHFGVPHFD
ALSIATMVIVMFVTFIESTGMFLAVGDMVERPVDQQALVRGLRVDGLGTLIGGIFNSFPHTSFSQNVGLVGVTGVKSRFV
CVTGGVILVLLGLFPKMAQIVASVPAFVLGGAGIVMFGMVAANGVKTLSRVDFVTNHNNLFIVAVSIGLGLVPVVSPHFF
AKLPGALAPLLHSGILLASVSAVLLNLVFNGVRSEQQAECEIRRAGHDLERRPAGLH

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Homo sapiens, GI44680148, Length=461, Percent_Identity=27.9826464208243, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI40316845, Length=461, Percent_Identity=27.9826464208243, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI44680145, Length=476, Percent_Identity=27.5210084033613, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI44680143, Length=480, Percent_Identity=27.7083333333333, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI222080105, Length=515, Percent_Identity=25.0485436893204, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI222080107, Length=234, Percent_Identity=29.0598290598291, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI87082181, Length=452, Percent_Identity=57.9646017699115, Blast_Score=514, Evalue=1e-147,
Organism=Escherichia coli, GI1790087, Length=443, Percent_Identity=32.9571106094808, Blast_Score=187, Evalue=8e-49,
Organism=Escherichia coli, GI87082178, Length=457, Percent_Identity=29.3216630196937, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI87081818, Length=409, Percent_Identity=31.2958435207824, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788843, Length=453, Percent_Identity=26.7108167770419, Blast_Score=126, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17558856, Length=506, Percent_Identity=27.0750988142292, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17541904, Length=523, Percent_Identity=22.7533460803059, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17542262, Length=445, Percent_Identity=24.7191011235955, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17542260, Length=194, Percent_Identity=28.8659793814433, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71993493, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21356175, Length=483, Percent_Identity=25.879917184265, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017588
- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 47358; Mature: 47358

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS01116 XANTH_URACIL_PERMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSNTVHPCDEILPAGRLVTLGLQHVLVMYAGAVAVPLIIGGALKLPKDQIAFLISADLF
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ACGIATLIQTLGVWIFGIRLPVIMGCTFASVGPLIAIGTNPSLGLLDVFGSTIAAGVIGI
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
VIAPVIGKLLRFFPPVVVGTVIAVIGLSLMGVGINWAAGGVGNPEYGDPVFLGLSLLVLT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LILLINRFGRGFLANIAVLLGIVAGFAIALGLGRVDLDGVAAAPWVGVVMPFHFGVPHFD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHH
ALSIATMVIVMFVTFIESTGMFLAVGDMVERPVDQQALVRGLRVDGLGTLIGGIFNSFPH
HHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC
TSFSQNVGLVGVTGVKSRFVCVTGGVILVLLGLFPKMAQIVASVPAFVLGGAGIVMFGMV
CCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AANGVKTLSRVDFVTNHNNLFIVAVSIGLGLVPVVSPHFFAKLPGALAPLLHSGILLASV
HHHHHHHHHHHHHEECCCCEEEEEEECCCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHH
SAVLLNLVFNGVRSEQQAECEIRRAGHDLERRPAGLH
HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]