| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is znuB [C]
Identifier: 238028492
GI number: 238028492
Start: 3344825
End: 3345628
Strand: Direct
Name: znuB [C]
Synonym: bglu_1g29560
Alternate gene names: 238028492
Gene position: 3344825-3345628 (Clockwise)
Preceding gene: 238028491
Following gene: 238028495
Centisome position: 85.62
GC content: 71.77
Gene sequence:
>804_bases ATGTTTGAATACGAATTCATGGTCAACGCGTTCGCCGCGTCGGGGATCGTCGCGGTGCTGGCGGGCGTGGTCGGCTACTT CCTGGTGCTGCGCGGCCAGACCTTCGCCGGCCACGCGCTCTCGCACGTCGGCTTCACCGGCGCCACCGGCGCGGTGCTGC TCGGCCTCTCGCCGATCTGGGGGATGGTGGGCTTCACGCTGGCGGCCGGCATCGCGATGGGCGCGCTCGGCGAACGGCTC GCGGGCCGCGACGTCGCGATCGGCGTGATCCTCTCGGTGGCGCTCGGCGCGGGCCTGCTGTTCCTGCATTTCTACACCAG CTACGCGACCCAGGTCACCGCGCTGCTGTTCGGCAACGTACTCGGCGTGAGCCACGCCACGCTGATGGCGCTGGCCGGCA TCGGCGTGGTCAGCCTGCTCGCGCTCGCGGCGATCCTGCGCCCGCTGCTGTTCGCCTCGCTGCAGCCGGAACTGGCCGAG GCCAAGGGCGTATCGCTGCGGCTCGTGTCGGTGCTGTTCCTCGCGATCTGCGCGCTCGCGGTAGCGGCCTGCACGCAGAT CGTCGGCGTGCTGCTGGTGTTCACGCTGCTGGTGGGGCCGGCCTCGGCCGCGCAGAACCTCGCCACGCGGCTTGCCACCG GGGTCTGGCTGGCCGCCCTGTTCGCGCTCGGCGAGGCCTGGCTCGGCATCACGCTCGCCTACTACACCGACTGGCCGACC AGCTTCTGGATCACCGCGCTGTCCGCGCTCGTCTACGCCGCAAGCCTCGGCGGGCGCCGGCTCGCGGCGGGCGCCTCGGC CTGA
Upstream 100 bases:
>100_bases CACGAACACGAGGACGACGGCCACCACGGGCACGGACATGCCCACCCGCATTCGCACGGCCACGCTCATCCGCACGGCCC TTCGCACGAGTAGGCGCACG
Downstream 100 bases:
>100_bases GGCGGCCGCGCGCCGCGCGCTAGAAAAAGCCCGCCGGCGCGCTGGCGGGCGCGGCGGCGGGCTTCGTCGTTTCCTGGCCC GAGCCATCGGGCGGGGCCGG
Product: Cation ABC transporter permease
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFEYEFMVNAFAASGIVAVLAGVVGYFLVLRGQTFAGHALSHVGFTGATGAVLLGLSPIWGMVGFTLAAGIAMGALGERL AGRDVAIGVILSVALGAGLLFLHFYTSYATQVTALLFGNVLGVSHATLMALAGIGVVSLLALAAILRPLLFASLQPELAE AKGVSLRLVSVLFLAICALAVAACTQIVGVLLVFTLLVGPASAAQNLATRLATGVWLAALFALGEAWLGITLAYYTDWPT SFWITALSALVYAASLGGRRLAAGASA
Sequences:
>Translated_267_residues MFEYEFMVNAFAASGIVAVLAGVVGYFLVLRGQTFAGHALSHVGFTGATGAVLLGLSPIWGMVGFTLAAGIAMGALGERL AGRDVAIGVILSVALGAGLLFLHFYTSYATQVTALLFGNVLGVSHATLMALAGIGVVSLLALAAILRPLLFASLQPELAE AKGVSLRLVSVLFLAICALAVAACTQIVGVLLVFTLLVGPASAAQNLATRLATGVWLAALFALGEAWLGITLAYYTDWPT SFWITALSALVYAASLGGRRLAAGASA >Mature_267_residues MFEYEFMVNAFAASGIVAVLAGVVGYFLVLRGQTFAGHALSHVGFTGATGAVLLGLSPIWGMVGFTLAAGIAMGALGERL AGRDVAIGVILSVALGAGLLFLHFYTSYATQVTALLFGNVLGVSHATLMALAGIGVVSLLALAAILRPLLFASLQPELAE AKGVSLRLVSVLFLAICALAVAACTQIVGVLLVFTLLVGPASAAQNLATRLATGVWLAALFALGEAWLGITLAYYTDWPT SFWITALSALVYAASLGGRRLAAGASA
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=262, Percent_Identity=28.2442748091603, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 27232; Mature: 27232
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEYEFMVNAFAASGIVAVLAGVVGYFLVLRGQTFAGHALSHVGFTGATGAVLLGLSPIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH GMVGFTLAAGIAMGALGERLAGRDVAIGVILSVALGAGLLFLHFYTSYATQVTALLFGNV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVSHATLMALAGIGVVSLLALAAILRPLLFASLQPELAEAKGVSLRLVSVLFLAICALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHH VAACTQIVGVLLVFTLLVGPASAAQNLATRLATGVWLAALFALGEAWLGITLAYYTDWPT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH SFWITALSALVYAASLGGRRLAAGASA HHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFEYEFMVNAFAASGIVAVLAGVVGYFLVLRGQTFAGHALSHVGFTGATGAVLLGLSPIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH GMVGFTLAAGIAMGALGERLAGRDVAIGVILSVALGAGLLFLHFYTSYATQVTALLFGNV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVSHATLMALAGIGVVSLLALAAILRPLLFASLQPELAEAKGVSLRLVSVLFLAICALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHH VAACTQIVGVLLVFTLLVGPASAAQNLATRLATGVWLAALFALGEAWLGITLAYYTDWPT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCH SFWITALSALVYAASLGGRRLAAGASA HHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7927711 [H]