Click here to switch to the map view.

The map label for this gene is xylB [H]

Identifier: 238028479

GI number: 238028479

Start: 3331266

End: 3332747

Strand: Direct

Name: xylB [H]

Synonym: bglu_1g29430

Alternate gene names: 238028479

Gene position: 3331266-3332747 (Clockwise)

Preceding gene: 238028478

Following gene: 238028480

Centisome position: 85.27

GC content: 74.09

Gene sequence:

>1482_bases
ATGTATCTCGGCATCGATCTCGGCACCTCGGAAGTCAAGGTGCTGCTGCTTTCCCCCGACGGCGCGGTCGTCGGCACGGC
GGGTACGCCGTTTAGCGTGTCGCGCCCGCATCCGCGCTGGGCGGAGCAGCATCCGGAAGACTGGTGGCGCGGCACGCGCG
AGGCACTCGCCGCGCTGCGCGAACGCCATCCCGCCGCCTATGCGCAGGTGCGCGGCATCGGCCTGTCGGGCCAGATGCAC
GGCGCGGTGCTGCTCGATCGCAACGACCGCGTGCTGCGCCCCGCCATCCTCTGGAACGACATGCGCAGCGACGAGGAATG
CACGGCGCTCACGCGGCGCGCGCCGGACCTGCACCGGCTCGCCGGCAACCTCGCGATGCCCGGCTTCACCGCGCCCAAGC
TGATCTGGGTGGCCGCGCACGAACCCGAGACGTTCGCGCAGATCGCTTGCGTGCTGCTGCCGAAGGACTACCTGCGGCTG
CAGCTGACCGGCAACCGCGTGTCCGATCCGTCGGACGCGGCCGGCACGCTGTGGCTCGACGTGGCGCGCCGCGACTGGTC
GGACGCGCTGCTCGAGGCGGGGGGCATGACGCGCGAGCAGATGCCGCGCGTCGTCGAGGGCAACGCACCGTCCGGCACGC
TGCGCGCCGAGGTGGCGCGCGAGCTGGGCCTGCGCGAGGGCATCGTGGTGGCGGGCGGCGGCGGCGACAACGCCACCAGC
GCGCTCGGCATCGGCGCGACGCAGCCCGGCGACGGCTTCGTCTCGCTCGGCACCTCGGGGGTGCTCAGCATCGTCGGCGA
CCGCTTCATGCCCTACCCCGAATCGGCGCTGCACGCGTTCTGCCACGCGATCCCGGACCGCTGGCAGCAGATGAGCGTGG
TGCTGTCGGCGGCGAGCTGCCTGCGCTGGGTCTGCAAGCTGACCGGCACCGACGAGCCGACCCTGATCGGCGAGGTCGAG
GCGCTCGATCCGGCCGCGCTCGCCGACGCGCCGCTTTTCCTGCCCTACCTGTCGGGCGAGCGCACTCCGCACAACGACCC
CTATGCGCAGGGCGTGTTCTACGGCATGACGCACGGCACCGATCGCGCGCGGCTCGGCTACGCGGTGCTGGAGGGCGTGA
CGCTGGCGCTCGCCGACGGCCACGACGCGCTCGTCGCGGCGGGCTCGGCGGCCGGCTCGCTCGCGCTGATCGGCGGCGGC
GCGCGCAGCGCGTACTGGGCCCAGCTGGTGGCCGACGCACTCGACGTGCGCACCCATCAGCTCGGCGGCGGCGCCACCGG
CGCGGCGCTCGGCGCGGCGCGGCTCGGCTGGCTCGCCGACGGCGGCGACCCGGCGCAGGTGCTGACGAAGCCGCCGCTGT
CGGCCGAGTACGTGCCGGCCGCGGGCCGCCATGCGTGGCTGCGCGAGCGACTCGAGACCTATCGCGCGCTGTATCGCCAC
GTCCGGCCGCTGTTCGAACCGTCGCGCGCACGCCTCGCCTGA

Upstream 100 bases:

>100_bases
GCGGCCAAGCCCGGCCCGCTCCGGGTCAACCGGCATTGGCATGGGCCGCGTCGCCCGGCTACATTAGCGACTCTCAGACG
ACCCACGGCCCGCCCCCACC

Downstream 100 bases:

>100_bases
CGGCGCCTGCGTTACGATCCGCTCCTTGTCCAGCCGCTCGTCCGACAGTCCACACATCGTGTCCAAATCCTCTGAAAAAC
TCGATCTCGCGACACGCGCC

Product: Xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MYLGIDLGTSEVKVLLLSPDGAVVGTAGTPFSVSRPHPRWAEQHPEDWWRGTREALAALRERHPAAYAQVRGIGLSGQMH
GAVLLDRNDRVLRPAILWNDMRSDEECTALTRRAPDLHRLAGNLAMPGFTAPKLIWVAAHEPETFAQIACVLLPKDYLRL
QLTGNRVSDPSDAAGTLWLDVARRDWSDALLEAGGMTREQMPRVVEGNAPSGTLRAEVARELGLREGIVVAGGGGDNATS
ALGIGATQPGDGFVSLGTSGVLSIVGDRFMPYPESALHAFCHAIPDRWQQMSVVLSAASCLRWVCKLTGTDEPTLIGEVE
ALDPAALADAPLFLPYLSGERTPHNDPYAQGVFYGMTHGTDRARLGYAVLEGVTLALADGHDALVAAGSAAGSLALIGGG
ARSAYWAQLVADALDVRTHQLGGGATGAALGAARLGWLADGGDPAQVLTKPPLSAEYVPAAGRHAWLRERLETYRALYRH
VRPLFEPSRARLA

Sequences:

>Translated_493_residues
MYLGIDLGTSEVKVLLLSPDGAVVGTAGTPFSVSRPHPRWAEQHPEDWWRGTREALAALRERHPAAYAQVRGIGLSGQMH
GAVLLDRNDRVLRPAILWNDMRSDEECTALTRRAPDLHRLAGNLAMPGFTAPKLIWVAAHEPETFAQIACVLLPKDYLRL
QLTGNRVSDPSDAAGTLWLDVARRDWSDALLEAGGMTREQMPRVVEGNAPSGTLRAEVARELGLREGIVVAGGGGDNATS
ALGIGATQPGDGFVSLGTSGVLSIVGDRFMPYPESALHAFCHAIPDRWQQMSVVLSAASCLRWVCKLTGTDEPTLIGEVE
ALDPAALADAPLFLPYLSGERTPHNDPYAQGVFYGMTHGTDRARLGYAVLEGVTLALADGHDALVAAGSAAGSLALIGGG
ARSAYWAQLVADALDVRTHQLGGGATGAALGAARLGWLADGGDPAQVLTKPPLSAEYVPAAGRHAWLRERLETYRALYRH
VRPLFEPSRARLA
>Mature_493_residues
MYLGIDLGTSEVKVLLLSPDGAVVGTAGTPFSVSRPHPRWAEQHPEDWWRGTREALAALRERHPAAYAQVRGIGLSGQMH
GAVLLDRNDRVLRPAILWNDMRSDEECTALTRRAPDLHRLAGNLAMPGFTAPKLIWVAAHEPETFAQIACVLLPKDYLRL
QLTGNRVSDPSDAAGTLWLDVARRDWSDALLEAGGMTREQMPRVVEGNAPSGTLRAEVARELGLREGIVVAGGGGDNATS
ALGIGATQPGDGFVSLGTSGVLSIVGDRFMPYPESALHAFCHAIPDRWQQMSVVLSAASCLRWVCKLTGTDEPTLIGEVE
ALDPAALADAPLFLPYLSGERTPHNDPYAQGVFYGMTHGTDRARLGYAVLEGVTLALADGHDALVAAGSAAGSLALIGGG
ARSAYWAQLVADALDVRTHQLGGGATGAALGAARLGWLADGGDPAQVLTKPPLSAEYVPAAGRHAWLRERLETYRALYRH
VRPLFEPSRARLA

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI41393575, Length=434, Percent_Identity=21.4285714285714, Blast_Score=86, Evalue=7e-17,
Organism=Escherichia coli, GI1789987, Length=492, Percent_Identity=52.8455284552846, Blast_Score=466, Evalue=1e-132,
Organism=Escherichia coli, GI1790005, Length=447, Percent_Identity=28.8590604026846, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789168, Length=459, Percent_Identity=27.4509803921569, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1790361, Length=478, Percent_Identity=23.2217573221757, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787789, Length=371, Percent_Identity=24.2587601078167, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17535599, Length=440, Percent_Identity=23.1818181818182, Blast_Score=85, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321633, Length=335, Percent_Identity=24.1791044776119, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24657106, Length=260, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24657102, Length=260, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 52530; Mature: 52530

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGIDLGTSEVKVLLLSPDGAVVGTAGTPFSVSRPHPRWAEQHPEDWWRGTREALAALR
CEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
ERHPAAYAQVRGIGLSGQMHGAVLLDRNDRVLRPAILWNDMRSDEECTALTRRAPDLHRL
HHCCHHHHHEECCCCCCCCCCEEEEECCCCEEEHHHHHCCCCCCHHHHHHHHCCCHHHHH
AGNLAMPGFTAPKLIWVAAHEPETFAQIACVLLPKDYLRLQLTGNRVSDPSDAAGTLWLD
HCCCCCCCCCCCEEEEEEECCCHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCEEEEE
VARRDWSDALLEAGGMTREQMPRVVEGNAPSGTLRAEVARELGLREGIVVAGGGGDNATS
HHHCCHHHHHHHCCCCCHHHCCCEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
ALGIGATQPGDGFVSLGTSGVLSIVGDRFMPYPESALHAFCHAIPDRWQQMSVVLSAASC
EEECCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRWVCKLTGTDEPTLIGEVEALDPAALADAPLFLPYLSGERTPHNDPYAQGVFYGMTHGT
HHHHHHHCCCCCCCEEEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCC
DRARLGYAVLEGVTLALADGHDALVAAGSAAGSLALIGGGARSAYWAQLVADALDVRTHQ
CHHHHHHHHHCCEEEEEECCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
LGGGATGAALGAARLGWLADGGDPAQVLTKPPLSAEYVPAAGRHAWLRERLETYRALYRH
CCCCCCHHHHHHHHHCEECCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VRPLFEPSRARLA
HHHHCCCCHHCCC
>Mature Secondary Structure
MYLGIDLGTSEVKVLLLSPDGAVVGTAGTPFSVSRPHPRWAEQHPEDWWRGTREALAALR
CEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHH
ERHPAAYAQVRGIGLSGQMHGAVLLDRNDRVLRPAILWNDMRSDEECTALTRRAPDLHRL
HHCCHHHHHEECCCCCCCCCCEEEEECCCCEEEHHHHHCCCCCCHHHHHHHHCCCHHHHH
AGNLAMPGFTAPKLIWVAAHEPETFAQIACVLLPKDYLRLQLTGNRVSDPSDAAGTLWLD
HCCCCCCCCCCCEEEEEEECCCHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCEEEEE
VARRDWSDALLEAGGMTREQMPRVVEGNAPSGTLRAEVARELGLREGIVVAGGGGDNATS
HHHCCHHHHHHHCCCCCHHHCCCEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCC
ALGIGATQPGDGFVSLGTSGVLSIVGDRFMPYPESALHAFCHAIPDRWQQMSVVLSAASC
EEECCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRWVCKLTGTDEPTLIGEVEALDPAALADAPLFLPYLSGERTPHNDPYAQGVFYGMTHGT
HHHHHHHCCCCCCCEEEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCC
DRARLGYAVLEGVTLALADGHDALVAAGSAAGSLALIGGGARSAYWAQLVADALDVRTHQ
CHHHHHHHHHCCEEEEEECCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
LGGGATGAALGAARLGWLADGGDPAQVLTKPPLSAEYVPAAGRHAWLRERLETYRALYRH
CCCCCCHHHHHHHHHCEECCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VRPLFEPSRARLA
HHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]