| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dalD [H]
Identifier: 238028478
GI number: 238028478
Start: 3329752
End: 3331146
Strand: Direct
Name: dalD [H]
Synonym: bglu_1g29420
Alternate gene names: 238028478
Gene position: 3329752-3331146 (Clockwise)
Preceding gene: 238028476
Following gene: 238028479
Centisome position: 85.24
GC content: 71.68
Gene sequence:
>1395_bases ATGAATCCTCCGCCGACCGCCGCGCCGGTGATCCTCCACATCGGCGCCGGTTCGTTCCATCGCGCGCATCAGGCGTGGTA TCTGCACCGCGTCAACGAACAGGCCGCGCCGGATGACCCGGCCAGCCGCTGGTCGCTGGTGGTCGCCAACATCCGCGACG ACATGCGCGCGACGATGGATGCGCTGGCCGCGCAACAGGGCCGCTACACGCTCGAGACGGTCACGCCCGACGGCGAGCGC GCCTACGAGACGATCGGCTCGATCGCGCGCGTGCTGCCTTGGTCGATCGACCTCGCCGCGCTGATCGAGGCGGGCGCCGA TCCGGCCTGTCGGATCGTCTCGTTCACGGTTACCGAGGGCGGCTACTACCTCGACGAACACAACCGCCTCGACGCCGGCA ACCCGGACCTCGCGGCCGACCTGCAGGGCGCGCGCACCACCATCTATGGCGCGCTCGCGGCGCTCCTGGCGGAGCGGCAG GCGCGCGGCGCCGGCCCGCTCACGCTGCAAAGCTGCGATAACCTGCGCAGCAACGGCGCGCGGTTTTGCGCCGGGATGCG CGAATTCCTCGAACGGCGCGGCCTGAACGGCCTGCTCGGCTGGTTCGACGCGCACGTGTCGTGCCCGAGCGCGATGGTCG ACCGCATCACGCCGCGCCCGACCCCCGACGTGCGCGAGCGCGTCAAGGCCGCCACCGGCGTGGACGACGCCTGCTCGGTG ATGGGCGAAGCGTTCATCCAGTGGGTGATCGAAGACGATTTCGTGGCGGGCCGGCCGCGCTGGGAGCTGGCGGGCGCCGA GCTGGTGGACGACGTCCATCCCTACGAGGAGGCGAAGATCCGCATCCTCAACGCCACCCACAGCTGCATCGCCTGGGCCG GCACGCTCGCGGGCCTGACCTACATCCACGAAGGCACCCACGATCCGGCGATCCGCGCGCTCGCGCATGCCTACGTGAGC GACGACGTGATCGACTCGCTCAGGCCGAGCCCGCTCGATCTCGCGCGCTATCGCGACGTGGTGCTCGAACGCTTCGGCAA CCCTTACGTCCTCGACACCAACCAGCGTGTCGCGGCCGACGGCTTCTCGAAGATCCCCGGCTTCATCGCACCGACCTTCG CCGACTGCTTCGCGCGCGGCGCCGAGCCGGTCTCCACCGCGGTGCTGCCGGCGCTGTTCCTGCGCTTCCTGGGCCGCTGG GCGCAAGGCCTGCTGCCCTACGAATACCAGGACGGCGTGATGGACCCGGGCGTCGCGCGCGCGATCGTGGCGGCCGACGA TCCGGTCGCCGCGCTGGCCGCCGAGCGCGCGCTGTGGGGCTCGCTGGCCGGCGACGAGCGGCTGGTGCGGGCGCTGCGCG CCGGGCTCGCACGCGTCGACGCCTGGCTCGCGTGA
Upstream 100 bases:
>100_bases TGCGGCCGCCTTGACTTTCGCGGAGCCGAATACGATCATTCGCCCACCAATAGAGCAAATGATCTTAACGAGGCCATGTC CGGCCGCAAGGAGACAAGGG
Downstream 100 bases:
>100_bases GCGCCCCGCAGGGCGCGCGGCGGCCAAGCCCGGCCCGCTCCGGGTCAACCGGCATTGGCATGGGCCGCGTCGCCCGGCTA CATTAGCGACTCTCAGACGA
Product: mannitol dehydrogenase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMDALAAQQGRYTLETVTPDGER AYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEGGYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQ ARGAGPLTLQSCDNLRSNGARFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLTYIHEGTHDPAIRALAHAYVS DDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRW AQGLLPYEYQDGVMDPGVARAIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA
Sequences:
>Translated_464_residues MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMDALAAQQGRYTLETVTPDGER AYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEGGYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQ ARGAGPLTLQSCDNLRSNGARFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLTYIHEGTHDPAIRALAHAYVS DDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRW AQGLLPYEYQDGVMDPGVARAIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA >Mature_464_residues MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMDALAAQQGRYTLETVTPDGER AYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEGGYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQ ARGAGPLTLQSCDNLRSNGARFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLTYIHEGTHDPAIRALAHAYVS DDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRW AQGLLPYEYQDGVMDPGVARAIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=360, Percent_Identity=38.0555555555556, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI1787823, Length=451, Percent_Identity=33.0376940133038, Blast_Score=210, Evalue=1e-55, Organism=Escherichia coli, GI1790779, Length=364, Percent_Identity=36.5384615384615, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI48994885, Length=379, Percent_Identity=23.7467018469657, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790028, Length=220, Percent_Identity=25.9090909090909, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324401, Length=454, Percent_Identity=35.0220264317181, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6320765, Length=454, Percent_Identity=35.0220264317181, Blast_Score=254, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.11 [H]
Molecular weight: Translated: 50284; Mature: 50284
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMD CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHHHHHHHHHH ALAAQQGRYTLETVTPDGERAYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEG HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECC GYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQARGAGPLTLQSCDNLRSNGA CEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCHH RFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLT HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHH YIHEGTHDPAIRALAHAYVSDDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAAD HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHC GFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRWAQGLLPYEYQDGVMDPGVAR CHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHE AIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA EEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMD CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHHHHHHHHHH ALAAQQGRYTLETVTPDGERAYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEG HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECC GYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQARGAGPLTLQSCDNLRSNGA CEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCHH RFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLT HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHH YIHEGTHDPAIRALAHAYVSDDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAAD HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHC GFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRWAQGLLPYEYQDGVMDPGVAR CHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHE AIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA EEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]