Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is dalD [H]

Identifier: 238028478

GI number: 238028478

Start: 3329752

End: 3331146

Strand: Direct

Name: dalD [H]

Synonym: bglu_1g29420

Alternate gene names: 238028478

Gene position: 3329752-3331146 (Clockwise)

Preceding gene: 238028476

Following gene: 238028479

Centisome position: 85.24

GC content: 71.68

Gene sequence:

>1395_bases
ATGAATCCTCCGCCGACCGCCGCGCCGGTGATCCTCCACATCGGCGCCGGTTCGTTCCATCGCGCGCATCAGGCGTGGTA
TCTGCACCGCGTCAACGAACAGGCCGCGCCGGATGACCCGGCCAGCCGCTGGTCGCTGGTGGTCGCCAACATCCGCGACG
ACATGCGCGCGACGATGGATGCGCTGGCCGCGCAACAGGGCCGCTACACGCTCGAGACGGTCACGCCCGACGGCGAGCGC
GCCTACGAGACGATCGGCTCGATCGCGCGCGTGCTGCCTTGGTCGATCGACCTCGCCGCGCTGATCGAGGCGGGCGCCGA
TCCGGCCTGTCGGATCGTCTCGTTCACGGTTACCGAGGGCGGCTACTACCTCGACGAACACAACCGCCTCGACGCCGGCA
ACCCGGACCTCGCGGCCGACCTGCAGGGCGCGCGCACCACCATCTATGGCGCGCTCGCGGCGCTCCTGGCGGAGCGGCAG
GCGCGCGGCGCCGGCCCGCTCACGCTGCAAAGCTGCGATAACCTGCGCAGCAACGGCGCGCGGTTTTGCGCCGGGATGCG
CGAATTCCTCGAACGGCGCGGCCTGAACGGCCTGCTCGGCTGGTTCGACGCGCACGTGTCGTGCCCGAGCGCGATGGTCG
ACCGCATCACGCCGCGCCCGACCCCCGACGTGCGCGAGCGCGTCAAGGCCGCCACCGGCGTGGACGACGCCTGCTCGGTG
ATGGGCGAAGCGTTCATCCAGTGGGTGATCGAAGACGATTTCGTGGCGGGCCGGCCGCGCTGGGAGCTGGCGGGCGCCGA
GCTGGTGGACGACGTCCATCCCTACGAGGAGGCGAAGATCCGCATCCTCAACGCCACCCACAGCTGCATCGCCTGGGCCG
GCACGCTCGCGGGCCTGACCTACATCCACGAAGGCACCCACGATCCGGCGATCCGCGCGCTCGCGCATGCCTACGTGAGC
GACGACGTGATCGACTCGCTCAGGCCGAGCCCGCTCGATCTCGCGCGCTATCGCGACGTGGTGCTCGAACGCTTCGGCAA
CCCTTACGTCCTCGACACCAACCAGCGTGTCGCGGCCGACGGCTTCTCGAAGATCCCCGGCTTCATCGCACCGACCTTCG
CCGACTGCTTCGCGCGCGGCGCCGAGCCGGTCTCCACCGCGGTGCTGCCGGCGCTGTTCCTGCGCTTCCTGGGCCGCTGG
GCGCAAGGCCTGCTGCCCTACGAATACCAGGACGGCGTGATGGACCCGGGCGTCGCGCGCGCGATCGTGGCGGCCGACGA
TCCGGTCGCCGCGCTGGCCGCCGAGCGCGCGCTGTGGGGCTCGCTGGCCGGCGACGAGCGGCTGGTGCGGGCGCTGCGCG
CCGGGCTCGCACGCGTCGACGCCTGGCTCGCGTGA

Upstream 100 bases:

>100_bases
TGCGGCCGCCTTGACTTTCGCGGAGCCGAATACGATCATTCGCCCACCAATAGAGCAAATGATCTTAACGAGGCCATGTC
CGGCCGCAAGGAGACAAGGG

Downstream 100 bases:

>100_bases
GCGCCCCGCAGGGCGCGCGGCGGCCAAGCCCGGCCCGCTCCGGGTCAACCGGCATTGGCATGGGCCGCGTCGCCCGGCTA
CATTAGCGACTCTCAGACGA

Product: mannitol dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMDALAAQQGRYTLETVTPDGER
AYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEGGYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQ
ARGAGPLTLQSCDNLRSNGARFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV
MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLTYIHEGTHDPAIRALAHAYVS
DDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRW
AQGLLPYEYQDGVMDPGVARAIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA

Sequences:

>Translated_464_residues
MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMDALAAQQGRYTLETVTPDGER
AYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEGGYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQ
ARGAGPLTLQSCDNLRSNGARFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV
MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLTYIHEGTHDPAIRALAHAYVS
DDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRW
AQGLLPYEYQDGVMDPGVARAIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA
>Mature_464_residues
MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMDALAAQQGRYTLETVTPDGER
AYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEGGYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQ
ARGAGPLTLQSCDNLRSNGARFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV
MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLTYIHEGTHDPAIRALAHAYVS
DDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRW
AQGLLPYEYQDGVMDPGVARAIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA

Specific function: Unknown

COG id: COG0246

COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannitol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1788497, Length=360, Percent_Identity=38.0555555555556, Blast_Score=228, Evalue=7e-61,
Organism=Escherichia coli, GI1787823, Length=451, Percent_Identity=33.0376940133038, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1790779, Length=364, Percent_Identity=36.5384615384615, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI48994885, Length=379, Percent_Identity=23.7467018469657, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1790028, Length=220, Percent_Identity=25.9090909090909, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324401, Length=454, Percent_Identity=35.0220264317181, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6320765, Length=454, Percent_Identity=35.0220264317181, Blast_Score=254, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR000669
- InterPro:   IPR013118
- InterPro:   IPR013131
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]

EC number: =1.1.1.11 [H]

Molecular weight: Translated: 50284; Mature: 50284

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMD
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHHHHHHHHHH
ALAAQQGRYTLETVTPDGERAYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEG
HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECC
GYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQARGAGPLTLQSCDNLRSNGA
CEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCHH
RFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV
HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH
MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLT
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHH
YIHEGTHDPAIRALAHAYVSDDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAAD
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHC
GFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRWAQGLLPYEYQDGVMDPGVAR
CHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHE
AIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA
EEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPPPTAAPVILHIGAGSFHRAHQAWYLHRVNEQAAPDDPASRWSLVVANIRDDMRATMD
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHHHHHHHHHH
ALAAQQGRYTLETVTPDGERAYETIGSIARVLPWSIDLAALIEAGADPACRIVSFTVTEG
HHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECC
GYYLDEHNRLDAGNPDLAADLQGARTTIYGALAALLAERQARGAGPLTLQSCDNLRSNGA
CEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCHH
RFCAGMREFLERRGLNGLLGWFDAHVSCPSAMVDRITPRPTPDVRERVKAATGVDDACSV
HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHH
MGEAFIQWVIEDDFVAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGLT
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHH
YIHEGTHDPAIRALAHAYVSDDVIDSLRPSPLDLARYRDVVLERFGNPYVLDTNQRVAAD
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHC
GFSKIPGFIAPTFADCFARGAEPVSTAVLPALFLRFLGRWAQGLLPYEYQDGVMDPGVAR
CHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHE
AIVAADDPVAALAAERALWGSLAGDERLVRALRAGLARVDAWLA
EEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]