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The map label for this gene is ygdL [C]

Identifier: 238028467

GI number: 238028467

Start: 3318943

End: 3319803

Strand: Reverse

Name: ygdL [C]

Synonym: bglu_1g29310

Alternate gene names: 238028467

Gene position: 3319803-3318943 (Counterclockwise)

Preceding gene: 238028471

Following gene: 238028464

Centisome position: 84.98

GC content: 70.73

Gene sequence:

>861_bases
ATGGCCCGAATCGACGTCGTCACGACGCAAGCCGATCTTACTCCTGGCTCGGCGAGACATTTTGACCCGGATCGGGCGAG
GCGCTTTGGCGGCGTCTCGCGCCTGTACGGGCCCGACGCGCTGGCGGCGTTCGAGCGTGCGCACGTGGCCGTGATCGGCA
TCGGCGGCGTCGGCTCGTGGACGGCCGAGGCGCTCGCGCGCAGCGCGATCGGCAACCTGACCCTGATCGATCTCGACAAT
GTCGCGCAAAGCAATACGAACCGCCAGATCCACGCGCTCGACGGCAATTACGGCAAGGCCAAGGTGGACGCGATGGCCGA
GCGGATCGCGCTGATCGATCCGGCCTGCCGCGTGCACCGCGTCGAGGATTTCGTCGAGGCCGAGAACTTCGACGCGCTGC
TGGGCGGCGGCTTCGACTACGTGGTCGACGCGATCGACAGCGTGCGCACCAAGGTGGCGCTGATCGCCTGGTGCGTCGCG
CGCGGCCAGCCGCTCGTGACGGTGGGCGGCGCGGGCGGCCAGCTCGACCCGACGCGGATTCGCATCGACGACCTGGCCCT
GACGATCCAGGACCCGCTGCTCTCGAAAGTGCGCGCGCAGTTGCGCAAGCAGCACGGTTTCCCGCGTGGACCGAAGGCGA
AGTTCAAGGTCAGCGCCGTCTATTCGGACGAGCCGCTGATCTACCCGGAGGCGGCCGCCTGCGAGGTCGACGACGCCACG
GCCGGCGAGGTGTCCGGCACGGGCGGCCCGGCCGGGCTCAACTGCGCGGGCTTCGGCTCGAGCGTGTGCGTGACGGCGAG
CTTCGGGTTCGCCGCCGCCGCGCACGCCCTGCGCGCGCTCGCGGTGGGCGCGCCGCGGTAG

Upstream 100 bases:

>100_bases
GAAATCATGCGTCGGAGCGGGGTGCCCGGCCGACACCGCGCCGATCAGGCAGAATAGGTGCTTTCGCGGCCAGGCCGCTT
TCACTTCTCTTACTTTCAGC

Downstream 100 bases:

>100_bases
GCGCCGGCCGCCCGCGCCGCGGCCTCAGTAGAGCAGCGCGCTGAGCTTGCGGCGCCACGCGGCGACCAGGTTCGGCTGGT
CGGCCGCCAGCTCGAACACC

Product: HesA/MoeB/ThiF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MARIDVVTTQADLTPGSARHFDPDRARRFGGVSRLYGPDALAAFERAHVAVIGIGGVGSWTAEALARSAIGNLTLIDLDN
VAQSNTNRQIHALDGNYGKAKVDAMAERIALIDPACRVHRVEDFVEAENFDALLGGGFDYVVDAIDSVRTKVALIAWCVA
RGQPLVTVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAACEVDDAT
AGEVSGTGGPAGLNCAGFGSSVCVTASFGFAAAAHALRALAVGAPR

Sequences:

>Translated_286_residues
MARIDVVTTQADLTPGSARHFDPDRARRFGGVSRLYGPDALAAFERAHVAVIGIGGVGSWTAEALARSAIGNLTLIDLDN
VAQSNTNRQIHALDGNYGKAKVDAMAERIALIDPACRVHRVEDFVEAENFDALLGGGFDYVVDAIDSVRTKVALIAWCVA
RGQPLVTVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAACEVDDAT
AGEVSGTGGPAGLNCAGFGSSVCVTASFGFAAAAHALRALAVGAPR
>Mature_285_residues
ARIDVVTTQADLTPGSARHFDPDRARRFGGVSRLYGPDALAAFERAHVAVIGIGGVGSWTAEALARSAIGNLTLIDLDNV
AQSNTNRQIHALDGNYGKAKVDAMAERIALIDPACRVHRVEDFVEAENFDALLGGGFDYVVDAIDSVRTKVALIAWCVAR
GQPLVTVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAACEVDDATA
GEVSGTGGPAGLNCAGFGSSVCVTASFGFAAAAHALRALAVGAPR

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=262, Percent_Identity=52.6717557251908, Blast_Score=269, Evalue=1e-73,
Organism=Escherichia coli, GI1787048, Length=136, Percent_Identity=31.6176470588235, Blast_Score=71, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6321790, Length=209, Percent_Identity=26.7942583732057, Blast_Score=90, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6322825, Length=214, Percent_Identity=29.9065420560748, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24582879, Length=143, Percent_Identity=31.4685314685315, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 29904; Mature: 29773

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIDVVTTQADLTPGSARHFDPDRARRFGGVSRLYGPDALAAFERAHVAVIGIGGVGSW
CCEEEEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHCEEEEEEECCCCHH
TAEALARSAIGNLTLIDLDNVAQSNTNRQIHALDGNYGKAKVDAMAERIALIDPACRVHR
HHHHHHHHHCCCEEEEECCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
VEDFVEAENFDALLGGGFDYVVDAIDSVRTKVALIAWCVARGQPLVTVGGAGGQLDPTRI
HHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEE
RIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAACEVDDAT
EEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCC
AGEVSGTGGPAGLNCAGFGSSVCVTASFGFAAAAHALRALAVGAPR
CCCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARIDVVTTQADLTPGSARHFDPDRARRFGGVSRLYGPDALAAFERAHVAVIGIGGVGSW
CEEEEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHCEEEEEEECCCCHH
TAEALARSAIGNLTLIDLDNVAQSNTNRQIHALDGNYGKAKVDAMAERIALIDPACRVHR
HHHHHHHHHCCCEEEEECCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
VEDFVEAENFDALLGGGFDYVVDAIDSVRTKVALIAWCVARGQPLVTVGGAGGQLDPTRI
HHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEE
RIDDLALTIQDPLLSKVRAQLRKQHGFPRGPKAKFKVSAVYSDEPLIYPEAAACEVDDAT
EEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCC
AGEVSGTGGPAGLNCAGFGSSVCVTASFGFAAAAHALRALAVGAPR
CCCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]