| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is eamA [H]
Identifier: 238028464
GI number: 238028464
Start: 3316076
End: 3316951
Strand: Reverse
Name: eamA [H]
Synonym: bglu_1g29280
Alternate gene names: 238028464
Gene position: 3316951-3316076 (Counterclockwise)
Preceding gene: 238028467
Following gene: 238028461
Centisome position: 84.91
GC content: 71.92
Gene sequence:
>876_bases ATGATGGCCATGAAGGACCTGTTGCTCGCGTTGGTGGTGATCGTCGCGTGGGGCGTCAACTTCGTCGTGATCAAGCTGGG CCTGCACGGCGTGCCGCCGATGCTGCTCGGCGCGCTGCGCTTCGCGCTGGCGGCGCTGCCGGCCGTGTTTTTCGTGCCGC GGCCGCGCATCCCGCTGCGCATGCTGGTGCTGTACGGCGCGACCATCCTGCTCGCGCAGTTCGTGTTCCTGTTTACCGCG ATGAACGTCGGCATGCCGGCCGGGGTCGCCTCGCTGGTGCTGCAGGCGCAGGCGTTCTTCACGCTCGGCTTCGCGCGGCT GTTCCTCGGCGAGCGCGTGCGCGCCTGGAACCTGGCGGGCCTCGCGATCGCCGCGCTCGGGCTCGTGACGATCGCCGCGC GCAGCGGCGGAGCGATGACGCTGGCCGGCTTCGCGCTGACGCTCTGCGCGGCCGCGTCGTGGGCGCTCGGCAACATCGTC ACGAAGCGGATCGGCAAGGTGGAGCTGGTGCCGCTGGTGGTGTGGGGCAGCCTGGTGCCGCCGCTGCCGTTCCTTGCGCT GTCGTTCGCGCTCGAAGGCCCGGCGCGGATCGAGGCCGCGCTCGGCGCGCTGTCGGGCGCGTCGGTGTTCGCGATCGTCT ACCTCGCGTGGGTCGCCACGCTGGTCGGCTACGCGCTGTGGGGCCGGCTGCTGTCGCGCTATCCGGCCGCGCAGGTCGCG CCGCTCTCGCTGGTGGTGCCGGTGGTCGGCATTGCCTCCTCGGCGCTGCTGCTCGGCGAACGCATGAGCGGCGCCGAATA CCTGGGCACCGCGCTGGTGATGGCCGGGCTCGTGGTCAACGTATTCGGCGGGCGGCTCGTGCGGCGCACGGCCTGA
Upstream 100 bases:
>100_bases TGCGCTCATTGTATCGGGCTCGCGGAAAGCGCGGCGACGGGTTGTCACAGCCGTTACACTGCCGGTTTGGTTCGGTCGGG ATCACGGAGGGCATGACGCG
Downstream 100 bases:
>100_bases ACACGGCCCGCGCCGCGCGAGGCCTTTTGCGTTGGACGGCGTGGCGGTGCGGCGAAGGCGTCAGCAAACCGCCGCGGACC GGCGGCCGGGCTTTAGGCCA
Product: DME family drug/metabolite transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MMAMKDLLLALVVIVAWGVNFVVIKLGLHGVPPMLLGALRFALAALPAVFFVPRPRIPLRMLVLYGATILLAQFVFLFTA MNVGMPAGVASLVLQAQAFFTLGFARLFLGERVRAWNLAGLAIAALGLVTIAARSGGAMTLAGFALTLCAAASWALGNIV TKRIGKVELVPLVVWGSLVPPLPFLALSFALEGPARIEAALGALSGASVFAIVYLAWVATLVGYALWGRLLSRYPAAQVA PLSLVVPVVGIASSALLLGERMSGAEYLGTALVMAGLVVNVFGGRLVRRTA
Sequences:
>Translated_291_residues MMAMKDLLLALVVIVAWGVNFVVIKLGLHGVPPMLLGALRFALAALPAVFFVPRPRIPLRMLVLYGATILLAQFVFLFTA MNVGMPAGVASLVLQAQAFFTLGFARLFLGERVRAWNLAGLAIAALGLVTIAARSGGAMTLAGFALTLCAAASWALGNIV TKRIGKVELVPLVVWGSLVPPLPFLALSFALEGPARIEAALGALSGASVFAIVYLAWVATLVGYALWGRLLSRYPAAQVA PLSLVVPVVGIASSALLLGERMSGAEYLGTALVMAGLVVNVFGGRLVRRTA >Mature_291_residues MMAMKDLLLALVVIVAWGVNFVVIKLGLHGVPPMLLGALRFALAALPAVFFVPRPRIPLRMLVLYGATILLAQFVFLFTA MNVGMPAGVASLVLQAQAFFTLGFARLFLGERVRAWNLAGLAIAALGLVTIAARSGGAMTLAGFALTLCAAASWALGNIV TKRIGKVELVPLVVWGSLVPPLPFLALSFALEGPARIEAALGALSGASVFAIVYLAWVATLVGYALWGRLLSRYPAAQVA PLSLVVPVVGIASSALLLGERMSGAEYLGTALVMAGLVVNVFGGRLVRRTA
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=290, Percent_Identity=52.0689655172414, Blast_Score=274, Evalue=5e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30375; Mature: 30375
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAMKDLLLALVVIVAWGVNFVVIKLGLHGVPPMLLGALRFALAALPAVFFVPRPRIPLR CCHHHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH MLVLYGATILLAQFVFLFTAMNVGMPAGVASLVLQAQAFFTLGFARLFLGERVRAWNLAG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIAALGLVTIAARSGGAMTLAGFALTLCAAASWALGNIVTKRIGKVELVPLVVWGSLVP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC PLPFLALSFALEGPARIEAALGALSGASVFAIVYLAWVATLVGYALWGRLLSRYPAAQVA CHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC PLSLVVPVVGIASSALLLGERMSGAEYLGTALVMAGLVVNVFGGRLVRRTA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure MMAMKDLLLALVVIVAWGVNFVVIKLGLHGVPPMLLGALRFALAALPAVFFVPRPRIPLR CCHHHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH MLVLYGATILLAQFVFLFTAMNVGMPAGVASLVLQAQAFFTLGFARLFLGERVRAWNLAG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIAALGLVTIAARSGGAMTLAGFALTLCAAASWALGNIVTKRIGKVELVPLVVWGSLVP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC PLPFLALSFALEGPARIEAALGALSGASVFAIVYLAWVATLVGYALWGRLLSRYPAAQVA CHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC PLSLVVPVVGIASSALLLGERMSGAEYLGTALVMAGLVVNVFGGRLVRRTA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]