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The map label for this gene is ycaR [C]

Identifier: 238028446

GI number: 238028446

Start: 3298584

End: 3298790

Strand: Direct

Name: ycaR [C]

Synonym: bglu_1g29100

Alternate gene names: 238028446

Gene position: 3298584-3298790 (Clockwise)

Preceding gene: 238028445

Following gene: 238028447

Centisome position: 84.44

GC content: 68.6

Gene sequence:

>207_bases
GTGGACGCTCGCCTGCTTGAAATCATCGTGTGCCCTATCTGCAAAGGCCCGCTCCACCATGACCGCGCCGCGCAGGAACT
GATCTGCCACGCCGACAAGCTCGCCTACCCGATCCGCGACGGCATCCCCGTGATGCTGGTCGACGAGGCGCGCCAGACCG
TGGAAGGCACGCCGGTCGATCCGGCCGGCCCCGCCGCCACGCACTGA

Upstream 100 bases:

>100_bases
GTAAAATTGGGCGCTTCCTGGCGCGATGCCCGACTCTGGGTGGTCCCTGTCGAGGCCGCGCTCGATCCCCGCCTTATCGC
TCTCGTTGTGGAGAAACTCC

Downstream 100 bases:

>100_bases
CCGCGGCCAGCGCCGCGGCCGCGGCACCGGTACTGCGTCCGGCATCGGTTCGCGCCCGCGCCTCGCGGCGGGCGCGCGGC
GCCCCGGTTCCGGGCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MDARLLEIIVCPICKGPLHHDRAAQELICHADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPAATH

Sequences:

>Translated_68_residues
MDARLLEIIVCPICKGPLHHDRAAQELICHADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPAATH
>Mature_68_residues
MDARLLEIIVCPICKGPLHHDRAAQELICHADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPAATH

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=62.7450980392157, Blast_Score=73, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 7351; Mature: 7351

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARLLEIIVCPICKGPLHHDRAAQELICHADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHEEHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCCCC
PAGPAATH
CCCCCCCC
>Mature Secondary Structure
MDARLLEIIVCPICKGPLHHDRAAQELICHADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHEEHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCCCCC
PAGPAATH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA