| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is crp [C]
Identifier: 238028442
GI number: 238028442
Start: 3293892
End: 3294599
Strand: Direct
Name: crp [C]
Synonym: bglu_1g29060
Alternate gene names: 238028442
Gene position: 3293892-3294599 (Clockwise)
Preceding gene: 238028439
Following gene: 238028445
Centisome position: 84.32
GC content: 70.2
Gene sequence:
>708_bases ATGCCCACGCCGCCCGACCTCGTTGCGTCGCAACTCGACGCGAGCCCCTGGTTCCAGACCCTGCCGGACGCGCTGCGGGC CCGGCTGCTCGCCAGCGCCACCGTGCGGACGCTCTCGGCCGGCGCCACGCTGTTCCGGCGCGGCGATCCGCCCTGCGGAC TCTACGCGGTGCTGTCCGGCGCGCTCAGCATCGGCGCGGTCGACTCGGACGGCCGCGAAGCGCTGCTGAGCGTGCTGGAG CCCACCACCTGGTTCGGCGAGATCTCGCTGTTCGACGGCCAGCCGCGCACGCACGATGCGATTGCCGTGGAGAACACACG AGTTTTGCATTTCACGCAAGCTGCATTGCAGCAACTGCTCGACGAGGAGCCGCGCTATTGGCAATATTTCGGCATCCTGA TGGCGCAGAAGCTTAGACTGTCGTTCATCACCGTGGAGGCCATCAGCCTGATGCCGGCGGCGCAGCGGCTGGCCGCGCGG CTGCTGATGATCGCCGAGGGCTACGGCGGCATCAGCACCGGCCGCACGCGCATCCGGCTCTCGCAGGACCGGCTCGCCGC GCTCGCCTCGCTGACCCGGCAGACCACCAACCAGCTGCTGAAGGCACTGGCCGCGCGCGGCGTGCTGCGCGTGCAGGCGG GAGCCATCGAGATCCTCGATATCGACGCGCTGCGGGCCGCGAGCGGCGAGGTCGGCCGCGCGATCTGA
Upstream 100 bases:
>100_bases GCGAGTTGATCGATCAGTGTTTTCATCGTGTTCGCCTCCTTTGACGAGCGCTATCATGCGCGTTGCCCCAGGCCCGCGCT GTCAGCTACCCGACATCCCC
Downstream 100 bases:
>100_bases GCCGGCGCGCGCGGTGCGAGGCGCGCTAGGGCAAACCGTCGAAGCGAGCGCGGCGACCGTGACGCGCGCGGCGATCGATC GGCCGGCCTGGGCCGGCACG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulatory Protein; Catabolite Gene Activator; CRP Family Transcriptional Regulator; CAMP-Dependent Transcriptional Regulator; Transcription Regulator Protein; Transcription Regulator; Transcriptional Regulator Anr; Cyclic AMP Receptor Protein; Transcriptional Regulator Dnr Type; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; Cyclic-Nucleotide-Gated Cation Channel; GntR Family Transcriptional Regulator; Transcriptional Regulator Crp; DNR Protein; CAMP-Bindin Transcriptional Regulator; Transcriptional Regulator Crp Family; Transcriptional Regulator Crp/Fnr Family Protein; Transcriptional Regulator Dnr/Nnr Type
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPTPPDLVASQLDASPWFQTLPDALRARLLASATVRTLSAGATLFRRGDPPCGLYAVLSGALSIGAVDSDGREALLSVLE PTTWFGEISLFDGQPRTHDAIAVENTRVLHFTQAALQQLLDEEPRYWQYFGILMAQKLRLSFITVEAISLMPAAQRLAAR LLMIAEGYGGISTGRTRIRLSQDRLAALASLTRQTTNQLLKALAARGVLRVQAGAIEILDIDALRAASGEVGRAI
Sequences:
>Translated_235_residues MPTPPDLVASQLDASPWFQTLPDALRARLLASATVRTLSAGATLFRRGDPPCGLYAVLSGALSIGAVDSDGREALLSVLE PTTWFGEISLFDGQPRTHDAIAVENTRVLHFTQAALQQLLDEEPRYWQYFGILMAQKLRLSFITVEAISLMPAAQRLAAR LLMIAEGYGGISTGRTRIRLSQDRLAALASLTRQTTNQLLKALAARGVLRVQAGAIEILDIDALRAASGEVGRAI >Mature_234_residues PTPPDLVASQLDASPWFQTLPDALRARLLASATVRTLSAGATLFRRGDPPCGLYAVLSGALSIGAVDSDGREALLSVLEP TTWFGEISLFDGQPRTHDAIAVENTRVLHFTQAALQQLLDEEPRYWQYFGILMAQKLRLSFITVEAISLMPAAQRLAARL LMIAEGYGGISTGRTRIRLSQDRLAALASLTRQTTNQLLKALAARGVLRVQAGAIEILDIDALRAASGEVGRAI
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789756, Length=190, Percent_Identity=21.5789473684211, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25350; Mature: 25218
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPPDLVASQLDASPWFQTLPDALRARLLASATVRTLSAGATLFRRGDPPCGLYAVLSG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHH ALSIGAVDSDGREALLSVLEPTTWFGEISLFDGQPRTHDAIAVENTRVLHFTQAALQQLL HHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCEEEHHHHHHHHHHH DEEPRYWQYFGILMAQKLRLSFITVEAISLMPAAQRLAARLLMIAEGYGGISTGRTRIRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE SQDRLAALASLTRQTTNQLLKALAARGVLRVQAGAIEILDIDALRAASGEVGRAI CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEHHHHHHCCCCCCCCC >Mature Secondary Structure PTPPDLVASQLDASPWFQTLPDALRARLLASATVRTLSAGATLFRRGDPPCGLYAVLSG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHH ALSIGAVDSDGREALLSVLEPTTWFGEISLFDGQPRTHDAIAVENTRVLHFTQAALQQLL HHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCEEEHHHHHHHHHHH DEEPRYWQYFGILMAQKLRLSFITVEAISLMPAAQRLAARLLMIAEGYGGISTGRTRIRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE SQDRLAALASLTRQTTNQLLKALAARGVLRVQAGAIEILDIDALRAASGEVGRAI CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA