Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028387

Identifier: 238028387

GI number: 238028387

Start: 3228943

End: 3229449

Strand: Reverse

Name: 238028387

Synonym: bglu_1g28480

Alternate gene names: NA

Gene position: 3229449-3228943 (Counterclockwise)

Preceding gene: 238028388

Following gene: 238028386

Centisome position: 82.67

GC content: 65.29

Gene sequence:

>507_bases
ATGATCGATCGCGGCGGCCCGTATGGTCGCGCGATGGGCGCGGCCGTCACGGCGCGCGACGCCGCGCTCGTGCGTTGCCG
CGACGCCCGCCTCCGCAAGCTCGCAGGGATCCTCGATGACATCGAGAGTTGCTTCTGGAATCGTGGCGATGACGCAGGGA
AGCTCGTAGCGATCGCCGTCACGCTCGCCTCGACGCTCGCGCTTGAAGCCCCGCGTCTGACGACAAAGCAACTTGGAACC
GCCTGCGACAAGTTCGTCCAGGCGATTGCCGCTGCTGAACAGGACTCGGCGAACTATCGTCGTCGACAGTATCGACAACT
GCGGCAAGCCTATCGTGCGCTTTACAACGACATCGATGCGCAGTGCACGGACGGGACGCGCCGTTTGCAAGTTAGCGCCC
TGCTGCGGGGCGTCGCGCTCGGCCAATCACTGGCGCAGGGCAGCTCGCGACTGGATATCGAACAGCTCAAGCTGGCGACT
GCCGTGCTCAAGGGGGAGGCCGCCTGA

Upstream 100 bases:

>100_bases
AGTTAGGGGCCAGGAGCGTCGGCTGGCGCGCGCAAGACGTCCAGAACTGGGTCGAATCCCGCCAATCGACGCGGGAGCAA
GCATGAGCGCGCCCTCCCTT

Downstream 100 bases:

>100_bases
TGCTCGCCCAAAGTCGCTTTGCACTAGGCAATACACGGCGAGGGCGTTGCGATTTGCGTCGTCCAGCATCGCGCGGTATC
CTGTGCGCGTCGCTGAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAVTLASTLALEAPRLTTKQLGT
ACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDAQCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLAT
AVLKGEAA

Sequences:

>Translated_168_residues
MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAVTLASTLALEAPRLTTKQLGT
ACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDAQCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLAT
AVLKGEAA
>Mature_168_residues
MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAVTLASTLALEAPRLTTKQLGT
ACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDAQCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLAT
AVLKGEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18169; Mature: 18169

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TLASTLALEAPRLTTKQLGTACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLATAVLKGEAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDRGGPYGRAMGAAVTARDAALVRCRDARLRKLAGILDDIESCFWNRGDDAGKLVAIAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TLASTLALEAPRLTTKQLGTACDKFVQAIAAAEQDSANYRRRQYRQLRQAYRALYNDIDA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QCTDGTRRLQVSALLRGVALGQSLAQGSSRLDIEQLKLATAVLKGEAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA