| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cysN [H]
Identifier: 238028374
GI number: 238028374
Start: 3215498
End: 3216814
Strand: Reverse
Name: cysN [H]
Synonym: bglu_1g28350
Alternate gene names: 238028374
Gene position: 3216814-3215498 (Counterclockwise)
Preceding gene: 238028375
Following gene: 339905977
Centisome position: 82.35
GC content: 67.88
Gene sequence:
>1317_bases ATGAGCATCATCGAGAACCACGAAGACCTCGGCGTGTTGCGCTTCATCACGGCGGGCAGCGTCGACGACGGCAAGAGCAC GCTGATCGGCCGCCTGCTGTACGACAGCAAGGCGGTGCTGTCCGACCAGCTGTCGGCGCTGTCGCGCGCGAAGAACAAGC GCACCGTGGGTGACGAGCTCGACCTCGCGCTGCTCACCGACGGGCTCGAAGCCGAGCGCGAGCAGGGCATCACCATCGAC GTGGCCTACCGCTACTTCGCCACCGCCAAGCGCAAGTTCATCATCGCCGACACGCCGGGCCACGAGCAGTACACGCGCAA CATGGTGACGGGCGCCTCGACCGCGCACGCCGCGATCATCCTGATCGACGCCACGCGCGTGACGGTCGAGGGCGGCGTCA CGCAGCTGCTGCCGCAGACCAAGCGCCATAGCGCGATCGTGAAGCTGCTCGGCCTGCAGCACGTGATCGTCGCGATCAAC AAGATGGATCTGGTCGAGTATTCGGAGGCCACCTTCGACCTGATCCGCGAGGCCTACGTCGCGCTCGCCGATCAGCTGGG CCTGGCCGGCGTGCGCTTCGTGCCGGTGTCGGCGCTCAAGGGCGACAACATCGTCACGCTGTCGGACAGCATGCCGTGGT ATTCGGGCGAGCCGCTGCTGGACCTGCTGGAAACGCTGCCGGTGGCGGTCGACGGCGGCGCGGCGCTGCGCTTCCCGGTG CAGTGGGTGGCGCGCCAGGACGGCAGCTCGGCCGACGACTTCCGCGGCTACATGGGCCGCGTGGAGGCCGGCGAGGTGCG GGTGGGCGACGAGATCGCGGTGCTGCCGTCGGGCCGCACGGCGACGGTGGCCGAGATCATCGCGCCGGTGCCGGGCGGCA CGGCTGCGGTAGAATCCGCGTTCGCGGGGCAGACGGTGACGATCCGCCTCGGCGAGGATGTGGACGTGTCGCGCGGCGAC GTGTTCGTGCCGAACGCGCAGCGCATCGAGCCGGCCAAAAAGCTCGAGGCGGACCTGTGCTGGTTCGACGAGATGCCGCT GTCGCCGCAGCGCAAGTATCTGCTCAAGCAGACCACCAACATGGTGTTTACGAAGATCGGCGCGGTCCGGCAGGTGCTCG ACGTGCATACGCTGTCGCAGGCCACCGACCGCCTGGATCTGAAGATGAACGACATCGGCCGGGTCGCGCTGACGCTGCAA AAGCCGATCGTCTGCGATACCTACGACGCGCATCCGGGCACCGGTGCGTTCGTGCTGATCGACGAGGCGACGCATCACAC GGTTGCGGCCGGCATGATCCGCGCGTATTCGGCGTGA
Upstream 100 bases:
>100_bases GAGCGCGGCGCGACGCGGATGGACGATCAGACCTCGGAAGCGGCGATGGAGCAGCGCAAGAAGCAGGGTTATTTCTGAAG CACGCGAGGATACAGACATC
Downstream 100 bases:
>100_bases TGCAGCGCCGTGGGCGGCGTGCGCCGCCCACGGCGACCAACCAATGAAGGGTGTATGGGCAAGGTGTATCTGATTGGCGC GGGGCCGGGCGCAGCGGACC
Product: sulfate adenylyltransferase subunit 1
Products: NA
Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSIIENHEDLGVLRFITAGSVDDGKSTLIGRLLYDSKAVLSDQLSALSRAKNKRTVGDELDLALLTDGLEAEREQGITID VAYRYFATAKRKFIIADTPGHEQYTRNMVTGASTAHAAIILIDATRVTVEGGVTQLLPQTKRHSAIVKLLGLQHVIVAIN KMDLVEYSEATFDLIREAYVALADQLGLAGVRFVPVSALKGDNIVTLSDSMPWYSGEPLLDLLETLPVAVDGGAALRFPV QWVARQDGSSADDFRGYMGRVEAGEVRVGDEIAVLPSGRTATVAEIIAPVPGGTAAVESAFAGQTVTIRLGEDVDVSRGD VFVPNAQRIEPAKKLEADLCWFDEMPLSPQRKYLLKQTTNMVFTKIGAVRQVLDVHTLSQATDRLDLKMNDIGRVALTLQ KPIVCDTYDAHPGTGAFVLIDEATHHTVAAGMIRAYSA
Sequences:
>Translated_438_residues MSIIENHEDLGVLRFITAGSVDDGKSTLIGRLLYDSKAVLSDQLSALSRAKNKRTVGDELDLALLTDGLEAEREQGITID VAYRYFATAKRKFIIADTPGHEQYTRNMVTGASTAHAAIILIDATRVTVEGGVTQLLPQTKRHSAIVKLLGLQHVIVAIN KMDLVEYSEATFDLIREAYVALADQLGLAGVRFVPVSALKGDNIVTLSDSMPWYSGEPLLDLLETLPVAVDGGAALRFPV QWVARQDGSSADDFRGYMGRVEAGEVRVGDEIAVLPSGRTATVAEIIAPVPGGTAAVESAFAGQTVTIRLGEDVDVSRGD VFVPNAQRIEPAKKLEADLCWFDEMPLSPQRKYLLKQTTNMVFTKIGAVRQVLDVHTLSQATDRLDLKMNDIGRVALTLQ KPIVCDTYDAHPGTGAFVLIDEATHHTVAAGMIRAYSA >Mature_437_residues SIIENHEDLGVLRFITAGSVDDGKSTLIGRLLYDSKAVLSDQLSALSRAKNKRTVGDELDLALLTDGLEAEREQGITIDV AYRYFATAKRKFIIADTPGHEQYTRNMVTGASTAHAAIILIDATRVTVEGGVTQLLPQTKRHSAIVKLLGLQHVIVAINK MDLVEYSEATFDLIREAYVALADQLGLAGVRFVPVSALKGDNIVTLSDSMPWYSGEPLLDLLETLPVAVDGGAALRFPVQ WVARQDGSSADDFRGYMGRVEAGEVRVGDEIAVLPSGRTATVAEIIAPVPGGTAAVESAFAGQTVTIRLGEDVDVSRGDV FVPNAQRIEPAKKLEADLCWFDEMPLSPQRKYLLKQTTNMVFTKIGAVRQVLDVHTLSQATDRLDLKMNDIGRVALTLQK PIVCDTYDAHPGTGAFVLIDEATHHTVAAGMIRAYSA
Specific function: May be the GTPase, regulating ATP sulfurylase activity [H]
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503475, Length=446, Percent_Identity=28.9237668161435, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI194018522, Length=428, Percent_Identity=27.803738317757, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI194097354, Length=428, Percent_Identity=27.803738317757, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI194018520, Length=428, Percent_Identity=27.803738317757, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI223555963, Length=439, Percent_Identity=28.4738041002278, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI5729864, Length=439, Percent_Identity=28.4738041002278, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI46094014, Length=430, Percent_Identity=27.4418604651163, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI4503471, Length=446, Percent_Identity=28.47533632287, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI34147630, Length=332, Percent_Identity=29.5180722891566, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1789108, Length=434, Percent_Identity=50, Blast_Score=397, Evalue=1e-112, Organism=Escherichia coli, GI1789737, Length=337, Percent_Identity=27.299703264095, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790412, Length=337, Percent_Identity=27.299703264095, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17552884, Length=449, Percent_Identity=28.9532293986637, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17569207, Length=449, Percent_Identity=28.9532293986637, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI115532067, Length=347, Percent_Identity=32.5648414985591, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI115532065, Length=347, Percent_Identity=32.5648414985591, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI32566303, Length=449, Percent_Identity=27.1714922048998, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI32566629, Length=443, Percent_Identity=26.6365688487585, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI25141371, Length=271, Percent_Identity=28.4132841328413, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI32566301, Length=144, Percent_Identity=32.6388888888889, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17556456, Length=340, Percent_Identity=26.1764705882353, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322937, Length=363, Percent_Identity=28.6501377410468, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6325337, Length=468, Percent_Identity=27.3504273504274, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6319594, Length=468, Percent_Identity=27.3504273504274, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6320377, Length=441, Percent_Identity=27.6643990929705, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324761, Length=266, Percent_Identity=29.6992481203008, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24652838, Length=449, Percent_Identity=29.3986636971047, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI17137572, Length=449, Percent_Identity=29.3986636971047, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI45553807, Length=449, Percent_Identity=28.5077951002227, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI45553816, Length=449, Percent_Identity=28.5077951002227, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI24651721, Length=449, Percent_Identity=28.5077951002227, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI17864154, Length=449, Percent_Identity=28.5077951002227, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI45550900, Length=311, Percent_Identity=32.7974276527331, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI17137380, Length=351, Percent_Identity=28.7749287749288, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI281363316, Length=263, Percent_Identity=31.1787072243346, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI17864358, Length=263, Percent_Identity=31.1787072243346, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI19921738, Length=175, Percent_Identity=30.2857142857143, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 47355; Mature: 47223
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIENHEDLGVLRFITAGSVDDGKSTLIGRLLYDSKAVLSDQLSALSRAKNKRTVGDEL CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC DLALLTDGLEAEREQGITIDVAYRYFATAKRKFIIADTPGHEQYTRNMVTGASTAHAAII CEEEEECCCHHHHHCCCEEEEEHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEE LIDATRVTVEGGVTQLLPQTKRHSAIVKLLGLQHVIVAINKMDLVEYSEATFDLIREAYV EEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHH ALADQLGLAGVRFVPVSALKGDNIVTLSDSMPWYSGEPLLDLLETLPVAVDGGAALRFPV HHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCEEECCCCEEEECH QWVARQDGSSADDFRGYMGRVEAGEVRVGDEIAVLPSGRTATVAEIIAPVPGGTAAVESA HHEECCCCCCHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHCCCCCCHHHHHHH FAGQTVTIRLGEDVDVSRGDVFVPNAQRIEPAKKLEADLCWFDEMPLSPQRKYLLKQTTN HCCCEEEEEECCCCCCCCCCEECCCCHHCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHH MVFTKIGAVRQVLDVHTLSQATDRLDLKMNDIGRVALTLQKPIVCDTYDAHPGTGAFVLI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCEEEECCCCCCCCCEEEEE DEATHHTVAAGMIRAYSA ECCCCHHHHHHHHHHCCC >Mature Secondary Structure SIIENHEDLGVLRFITAGSVDDGKSTLIGRLLYDSKAVLSDQLSALSRAKNKRTVGDEL CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC DLALLTDGLEAEREQGITIDVAYRYFATAKRKFIIADTPGHEQYTRNMVTGASTAHAAII CEEEEECCCHHHHHCCCEEEEEHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEE LIDATRVTVEGGVTQLLPQTKRHSAIVKLLGLQHVIVAINKMDLVEYSEATFDLIREAYV EEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHH ALADQLGLAGVRFVPVSALKGDNIVTLSDSMPWYSGEPLLDLLETLPVAVDGGAALRFPV HHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCEEECCCCEEEECH QWVARQDGSSADDFRGYMGRVEAGEVRVGDEIAVLPSGRTATVAEIIAPVPGGTAAVESA HHEECCCCCCHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHCCCCCCHHHHHHH FAGQTVTIRLGEDVDVSRGDVFVPNAQRIEPAKKLEADLCWFDEMPLSPQRKYLLKQTTN HCCCEEEEEECCCCCCCCCCEECCCCHHCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHH MVFTKIGAVRQVLDVHTLSQATDRLDLKMNDIGRVALTLQKPIVCDTYDAHPGTGAFVLI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCEEEECCCCCCCCCEEEEE DEATHHTVAAGMIRAYSA ECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA