Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is cysD [H]

Identifier: 238028375

GI number: 238028375

Start: 3216837

End: 3217799

Strand: Reverse

Name: cysD [H]

Synonym: bglu_1g28360

Alternate gene names: 238028375

Gene position: 3217799-3216837 (Counterclockwise)

Preceding gene: 238028376

Following gene: 238028374

Centisome position: 82.37

GC content: 67.5

Gene sequence:

>963_bases
ATGAGCACGACGCTCGAACCATCCACCTTCGCCCGGCCGGCCGGCACTGCCGGCCGGATGGGCCATCTCGACTGGCTCGA
GGCCGAGTCGATCCACATCCTGCGCGAACTCGTGGCCGAGTGCAGCAAGCCCGCGCTGCTGTTTTCGGGCGGCAAGGATT
CGGTGGTCGTGCTGCATCTGGCGCTGAAGGCATTCGGCCTGGGCGCGGGCCGCAAGACCGCGCTGCCGTTCCCGCTGGTC
CACATCGACACGGGCCACAATTACGACGAGGTGATCGATTTCCGTGATCGCCGCGCCAAGCAGATCGGCGCCGAGCTGGT
GGTCGGCCACGTCGAGGAGTCGATCGCGCGCGGCACCGTGGTGCTGCGCCGCGAAACCGATTCGCGCAACGCCGCGCAGG
CCGTCACGCTGCTCGAGACGATCGAGCAGCACGGCTACACGGCGATGATCGGCGGGGCGCGCCGCGACGAAGAAAAGGCG
CGCGCCAAGGAGCGCATCTTCTCGTTTCGCGACGAGTTCGGCCAATGGGACCCGAAGGCCCAGCGTCCGGAACTCTGGAG
CCTCTACAACGCGCGCCTGCACCCGGGCGAGCACCTGCGCGTGTTCCCGATCTCGAACTGGACCGAGCTCGACGTCTGGC
AATACATCGCCCGCGAGAATCTCGAGCTGCCCTCGATCTACTACGCCCACCAGCGCGAGATCGTGCGCCGCAACGGCCTG
CTGGTGCCCGTCACGCCGCTCACGCCGATGCGCGAGGGCGAGACGAGCGAGCGCGCGCTGGTGCGCTTCCGCACGGTGGG
CGACATCAGCTGCACCTGCCCGGTGGAGAGCGATGCCGACGATGTCGAGAAGATCATCGCCGAGACCGCAGTGACCGAGA
TCACCGAGCGCGGCGCGACGCGGATGGACGATCAGACCTCGGAAGCGGCGATGGAGCAGCGCAAGAAGCAGGGTTATTTC
TGA

Upstream 100 bases:

>100_bases
CAACGCCTGAGGCGCCGCCGTGCGCCTCGCCCACGAACGACAGCAAGCGCGCCGCCCGCCCCGGCGGGCGGCCATCAGCA
AACCAGCAAGGACTGACATC

Downstream 100 bases:

>100_bases
AGCACGCGAGGATACAGACATCATGAGCATCATCGAGAACCACGAAGACCTCGGCGTGTTGCGCTTCATCACGGCGGGCA
GCGTCGACGACGGCAAGAGC

Product: sulfate adenylyltransferase subunit 2

Products: NA

Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSTTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGAGRKTALPFPLV
HIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTVVLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKA
RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL
LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF

Sequences:

>Translated_320_residues
MSTTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGAGRKTALPFPLV
HIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTVVLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKA
RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL
LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF
>Mature_319_residues
STTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGAGRKTALPFPLVH
IDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTVVLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKAR
AKERIFSFRDEFGQWDPKAQRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGLL
VPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF

Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]

COG id: COG0175

COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789109, Length=304, Percent_Identity=46.7105263157895, Blast_Score=271, Evalue=4e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002500
- InterPro:   IPR014729
- InterPro:   IPR011784 [H]

Pfam domain/function: PF01507 PAPS_reduct [H]

EC number: =2.7.7.4 [H]

Molecular weight: Translated: 36037; Mature: 35906

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHH
ALKAFGLGAGRKTALPFPLVHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTV
HHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPKA
EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
QRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL
CCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT
EEEECCCCCCCCCCCHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
RMDDQTSEAAMEQRKKQGYF
CCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHH
ALKAFGLGAGRKTALPFPLVHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTV
HHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPKA
EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
QRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL
CCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT
EEEECCCCCCCCCCCHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
RMDDQTSEAAMEQRKKQGYF
CCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]