| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cysD [H]
Identifier: 238028375
GI number: 238028375
Start: 3216837
End: 3217799
Strand: Reverse
Name: cysD [H]
Synonym: bglu_1g28360
Alternate gene names: 238028375
Gene position: 3217799-3216837 (Counterclockwise)
Preceding gene: 238028376
Following gene: 238028374
Centisome position: 82.37
GC content: 67.5
Gene sequence:
>963_bases ATGAGCACGACGCTCGAACCATCCACCTTCGCCCGGCCGGCCGGCACTGCCGGCCGGATGGGCCATCTCGACTGGCTCGA GGCCGAGTCGATCCACATCCTGCGCGAACTCGTGGCCGAGTGCAGCAAGCCCGCGCTGCTGTTTTCGGGCGGCAAGGATT CGGTGGTCGTGCTGCATCTGGCGCTGAAGGCATTCGGCCTGGGCGCGGGCCGCAAGACCGCGCTGCCGTTCCCGCTGGTC CACATCGACACGGGCCACAATTACGACGAGGTGATCGATTTCCGTGATCGCCGCGCCAAGCAGATCGGCGCCGAGCTGGT GGTCGGCCACGTCGAGGAGTCGATCGCGCGCGGCACCGTGGTGCTGCGCCGCGAAACCGATTCGCGCAACGCCGCGCAGG CCGTCACGCTGCTCGAGACGATCGAGCAGCACGGCTACACGGCGATGATCGGCGGGGCGCGCCGCGACGAAGAAAAGGCG CGCGCCAAGGAGCGCATCTTCTCGTTTCGCGACGAGTTCGGCCAATGGGACCCGAAGGCCCAGCGTCCGGAACTCTGGAG CCTCTACAACGCGCGCCTGCACCCGGGCGAGCACCTGCGCGTGTTCCCGATCTCGAACTGGACCGAGCTCGACGTCTGGC AATACATCGCCCGCGAGAATCTCGAGCTGCCCTCGATCTACTACGCCCACCAGCGCGAGATCGTGCGCCGCAACGGCCTG CTGGTGCCCGTCACGCCGCTCACGCCGATGCGCGAGGGCGAGACGAGCGAGCGCGCGCTGGTGCGCTTCCGCACGGTGGG CGACATCAGCTGCACCTGCCCGGTGGAGAGCGATGCCGACGATGTCGAGAAGATCATCGCCGAGACCGCAGTGACCGAGA TCACCGAGCGCGGCGCGACGCGGATGGACGATCAGACCTCGGAAGCGGCGATGGAGCAGCGCAAGAAGCAGGGTTATTTC TGA
Upstream 100 bases:
>100_bases CAACGCCTGAGGCGCCGCCGTGCGCCTCGCCCACGAACGACAGCAAGCGCGCCGCCCGCCCCGGCGGGCGGCCATCAGCA AACCAGCAAGGACTGACATC
Downstream 100 bases:
>100_bases AGCACGCGAGGATACAGACATCATGAGCATCATCGAGAACCACGAAGACCTCGGCGTGTTGCGCTTCATCACGGCGGGCA GCGTCGACGACGGCAAGAGC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSTTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGAGRKTALPFPLV HIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTVVLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKA RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF
Sequences:
>Translated_320_residues MSTTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGAGRKTALPFPLV HIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTVVLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKA RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF >Mature_319_residues STTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGAGRKTALPFPLVH IDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTVVLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKAR AKERIFSFRDEFGQWDPKAQRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGLL VPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=304, Percent_Identity=46.7105263157895, Blast_Score=271, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 36037; Mature: 35906
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHH ALKAFGLGAGRKTALPFPLVHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTV HHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPKA EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL CCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT EEEECCCCCCCCCCCHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC RMDDQTSEAAMEQRKKQGYF CCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STTLEPSTFARPAGTAGRMGHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLHL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHH ALKAFGLGAGRKTALPFPLVHIDTGHNYDEVIDFRDRRAKQIGAELVVGHVEESIARGTV HHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VLRRETDSRNAAQAVTLLETIEQHGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPKA EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QRPELWSLYNARLHPGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHQREIVRRNGL CCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LVPVTPLTPMREGETSERALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT EEEECCCCCCCCCCCHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC RMDDQTSEAAMEQRKKQGYF CCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]