Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is efeU [H]

Identifier: 238028100

GI number: 238028100

Start: 2909653

End: 2910495

Strand: Reverse

Name: efeU [H]

Synonym: bglu_1g25510

Alternate gene names: 238028100

Gene position: 2910495-2909653 (Counterclockwise)

Preceding gene: 238028101

Following gene: 238028099

Centisome position: 74.5

GC content: 66.67

Gene sequence:

>843_bases
ATGGGTCAAATCATCTTCATCGTCTGGCGCGAGAGCGTCGAGGCGCTGCTCGTCGTGGGCATTCTCTATGCCTGGCTCAG
CAACGGCGACGCCCAGGCGCGCCGCGGGCTGCCGTATCTATGGGTCGGCGTCGCGGCCGGCCTGCTGCTGGCGGTCGGTC
TCGGCGCCGCGCTGGTCGGCTTCACCGAAGTGTTGTCCGGCGATGCGCAGGACTATTTCCAGACCGCGATGGTGCTGGTT
GCCTGCGTGCTGATCGTGCAGATGGTGATCTGGATGAAGCGGCACGGGCGCACGCTCAAGCGCGAAATGGAGCAATCGCT
GCAGGAGACCACGAAGACCGCGAACTGGTGGGGCGTGGCCGTGCTGGTCGCGCTCGCGATCGCGCGCGAGGGCAGCGAGA
CGGTGATCTTCCTCTACGGCCTCGGGTTCGGGCAGACCGGCCATGTCGGCGGAGCGCAGGTGGTCGCGGTATTGATCGGC
TTCGCGCTCGCGCTGCTGACCTTCTACGTGCTGCAGCTGGGCGGCAAGGTGTTCTCGTGGCGGCTGTTCTTCCGCGTCAC
GGAAATCATGCTGCTGTTCCTCGGCGCAGGCCTGTTCGAAGCCGGCGTCGACAAGCTGATCGACAAGGAAATCCTGCCGC
TCGGCATTGCGCAGCTGTGGGACACCTCGTCGATCCTCGACGACTCGAGCACGTTCGGCTCGCTGGTCGCGACGCTGACC
GGCTATCGTGCGCATCCGGCGCTGACCAACCTGGTTGCCTACCTGGCCTATTGGGCGGTCGTCTACGCGCTGCTCAGGCT
CACGGCGCGCCGTCCGGTCGCCGTGGCGGGGCGGGCCGCATGA

Upstream 100 bases:

>100_bases
ATTTCCATCAGCAGGCGCAGGGCGTCATCGTCGCAAAGTAGTCCCGATTTATCGTGCGGCCGCGGAGGCCCCGCCGCGGC
CGGGGTACACGGAGGTTTCA

Downstream 100 bases:

>100_bases
GTACCGCCGTGCGCGCCGCGCGCCGGAGCCGGCTCTCCGAGGTCGGCCACTGGATGCAGCGTCACGGCGGGCTGATTCGC
GCAATCCAGTGGGTCGTGGT

Product: FTR1 family iron permease

Products: NA

Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MGQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVGFTEVLSGDAQDYFQTAMVLV
ACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVAVLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIG
FALALLTFYVLQLGGKVFSWRLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT
GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA

Sequences:

>Translated_280_residues
MGQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVGFTEVLSGDAQDYFQTAMVLV
ACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVAVLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIG
FALALLTFYVLQLGGKVFSWRLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT
GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA
>Mature_279_residues
GQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVGFTEVLSGDAQDYFQTAMVLVA
CVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVAVLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIGF
ALALLTFYVLQLGGKVFSWRLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLTG
YRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA

Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]

COG id: COG0672

COG function: function code P; High-affinity Fe2+/Pb2+ permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320993, Length=215, Percent_Identity=25.1162790697674, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005217
- InterPro:   IPR004923 [H]

Pfam domain/function: PF03239 FTR1 [H]

EC number: NA

Molecular weight: Translated: 30339; Mature: 30208

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVG
CCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FTEVLSGDAQDYFQTAMVLVACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH
VLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIGFALALLTFYVLQLGGKVFSW
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHH
GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVG
CCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FTEVLSGDAQDYFQTAMVLVACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH
VLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIGFALALLTFYVLQLGGKVFSW
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHH
GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]