| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is efeU [H]
Identifier: 238028100
GI number: 238028100
Start: 2909653
End: 2910495
Strand: Reverse
Name: efeU [H]
Synonym: bglu_1g25510
Alternate gene names: 238028100
Gene position: 2910495-2909653 (Counterclockwise)
Preceding gene: 238028101
Following gene: 238028099
Centisome position: 74.5
GC content: 66.67
Gene sequence:
>843_bases ATGGGTCAAATCATCTTCATCGTCTGGCGCGAGAGCGTCGAGGCGCTGCTCGTCGTGGGCATTCTCTATGCCTGGCTCAG CAACGGCGACGCCCAGGCGCGCCGCGGGCTGCCGTATCTATGGGTCGGCGTCGCGGCCGGCCTGCTGCTGGCGGTCGGTC TCGGCGCCGCGCTGGTCGGCTTCACCGAAGTGTTGTCCGGCGATGCGCAGGACTATTTCCAGACCGCGATGGTGCTGGTT GCCTGCGTGCTGATCGTGCAGATGGTGATCTGGATGAAGCGGCACGGGCGCACGCTCAAGCGCGAAATGGAGCAATCGCT GCAGGAGACCACGAAGACCGCGAACTGGTGGGGCGTGGCCGTGCTGGTCGCGCTCGCGATCGCGCGCGAGGGCAGCGAGA CGGTGATCTTCCTCTACGGCCTCGGGTTCGGGCAGACCGGCCATGTCGGCGGAGCGCAGGTGGTCGCGGTATTGATCGGC TTCGCGCTCGCGCTGCTGACCTTCTACGTGCTGCAGCTGGGCGGCAAGGTGTTCTCGTGGCGGCTGTTCTTCCGCGTCAC GGAAATCATGCTGCTGTTCCTCGGCGCAGGCCTGTTCGAAGCCGGCGTCGACAAGCTGATCGACAAGGAAATCCTGCCGC TCGGCATTGCGCAGCTGTGGGACACCTCGTCGATCCTCGACGACTCGAGCACGTTCGGCTCGCTGGTCGCGACGCTGACC GGCTATCGTGCGCATCCGGCGCTGACCAACCTGGTTGCCTACCTGGCCTATTGGGCGGTCGTCTACGCGCTGCTCAGGCT CACGGCGCGCCGTCCGGTCGCCGTGGCGGGGCGGGCCGCATGA
Upstream 100 bases:
>100_bases ATTTCCATCAGCAGGCGCAGGGCGTCATCGTCGCAAAGTAGTCCCGATTTATCGTGCGGCCGCGGAGGCCCCGCCGCGGC CGGGGTACACGGAGGTTTCA
Downstream 100 bases:
>100_bases GTACCGCCGTGCGCGCCGCGCGCCGGAGCCGGCTCTCCGAGGTCGGCCACTGGATGCAGCGTCACGGCGGGCTGATTCGC GCAATCCAGTGGGTCGTGGT
Product: FTR1 family iron permease
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MGQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVGFTEVLSGDAQDYFQTAMVLV ACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVAVLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIG FALALLTFYVLQLGGKVFSWRLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA
Sequences:
>Translated_280_residues MGQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVGFTEVLSGDAQDYFQTAMVLV ACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVAVLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIG FALALLTFYVLQLGGKVFSWRLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA >Mature_279_residues GQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVGFTEVLSGDAQDYFQTAMVLVA CVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVAVLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIGF ALALLTFYVLQLGGKVFSWRLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLTG YRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320993, Length=215, Percent_Identity=25.1162790697674, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 30339; Mature: 30208
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVG CCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FTEVLSGDAQDYFQTAMVLVACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH VLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIGFALALLTFYVLQLGGKVFSW HHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHH GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GQIIFIVWRESVEALLVVGILYAWLSNGDAQARRGLPYLWVGVAAGLLLAVGLGAALVG CCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FTEVLSGDAQDYFQTAMVLVACVLIVQMVIWMKRHGRTLKREMEQSLQETTKTANWWGVA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH VLVALAIAREGSETVIFLYGLGFGQTGHVGGAQVVAVLIGFALALLTFYVLQLGGKVFSW HHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RLFFRVTEIMLLFLGAGLFEAGVDKLIDKEILPLGIAQLWDTSSILDDSSTFGSLVATLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHH GYRAHPALTNLVAYLAYWAVVYALLRLTARRPVAVAGRAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]