| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028099
Identifier: 238028099
GI number: 238028099
Start: 2908256
End: 2909656
Strand: Reverse
Name: 238028099
Synonym: bglu_1g25500
Alternate gene names: NA
Gene position: 2909656-2908256 (Counterclockwise)
Preceding gene: 238028100
Following gene: 238028095
Centisome position: 74.48
GC content: 68.67
Gene sequence:
>1401_bases ATGAGTACCGCCGTGCGCGCCGCGCGCCGGAGCCGGCTCTCCGAGGTCGGCCACTGGATGCAGCGTCACGGCGGGCTGAT TCGCGCAATCCAGTGGGTCGTGGTCGCCGTCTATGCGTTCCTGATCCTGGTGCCGGCGTTCACGCCGCTGCCCGACGACA CGGCCCACCTGTGGAGCAATCTGACGCTGGCCGCGCAGTTCGTGTTCTGGGGCATCTGGTGGCCGTTCGTGCTGCTGTCG ATGGTGATGCTCGGGCGCGTCTGGTGCGGCGTGCTGTGCCCCGAGGGCGCGCTTGCCGAGTTCGCCAGCAAGTTCGGCCG CGGGCGCGCGATTCCGCGCTGGATGCGCTGGGGCGGCTGGCCCTTCGTGGCGTTCGGCATCACCACCATCTACGGGCAGA TGGTCAGCGTCTACCAGTATCCACGCGCGGTGCTGCTGGTGCTGGGCGGCTCGACGTTCGCCGCGATGGTGATCGGGCTG CTGTACGGGCGCGAGAAGCGCGTCTGGTGCAAGTATTTATGCCCCGTCAACGGTGTATTCGCATTGCTCGCGCGCCTGGC GCCGCTGCGCTTCAAGGTCGACGAAGCCGCCTGGCGCCGCTCCTACACGCAGGGCGAGCATGGCCATCGCGTGATTCCGA TCAACTGCGCGCCGCTCGTGCCGCTGCGCAACATGAAGGGCGCGGCCGCCTGCCATATGTGCGGCCGATGCAGCGGGCAC CGCGATGCGATTGCGCTGACGCTGCGCTCACCGGCCGAGGAGGTCGTCGAGCTCGGCGACAGGCAGGCGAGCGCTTGGGA CACCGCGCTGATCCTGTACGGTCTGCTCGGCATCGCGATCGGCGCGTTCCATTGGAGCGCGAGCCCGTGGTTCGTGGCGA TCAAGCAGTGGCTCGCGGGCTGGCTGATCGACCGCGACATCACCTGGCCGCTCGAGACCAACGCGCCGTGGTTCCTGCTC ACTCACTATCCGCAGCAGAACGACGTGTTTTCGTGGCTCGACGGCGGCCTCGTGGTCGGCTATATCGTCGGTACGGGCCT GATCTACGGCACCGCGCTGCTGCTCGTGCTGGCGGCCTCGACCGCGATGCTCGGCCGCTTCGAGCGCGTCCGGCTGCACC ATCTGGCGCAAGCGCTGATTCCGCTCGCCGGGGCCGGTGTGTTCCTCGGCCTGTCGGCGACCACGTTGTCGCTGCTGCGC GCCGAGCACGTGCCCCTCGATTGGGCCTCGCCGGTGCGAATCGCGATCCTCGTCGTCTCGAATATGTGGAGCGCCTGGCT GGCCTGGCGCGTGGCCGGCCGCTATGCCAGCCTGCCGCGGCGCCTGGCCGCGACGGCCGGTTTCCTGCTGGCGCTCGCGA TCGTCGATAGCGCCTGGTGGCTGATGTTCTGGTACTTCTGA
Upstream 100 bases:
>100_bases CGCTGACCAACCTGGTTGCCTACCTGGCCTATTGGGCGGTCGTCTACGCGCTGCTCAGGCTCACGGCGCGCCGTCCGGTC GCCGTGGCGGGGCGGGCCGC
Downstream 100 bases:
>100_bases CGCCTGATCGCGGACGCGGCGCGCTGGACGGTTGGCGCTTTACGTCCCGTGAACGCCGCTAAACAAAAAAAGCGGCGTGC CCGTCCGGCACGCCGCTTTC
Product: polyferredoxin-like protein
Products: NA
Alternate protein names: Regulatory Protein; Polyferredoxin; Polyferredoxin-Like Protein; Polyferredoxin-Like; Ferredoxin; Nitrogen Assimilation Regulatory Protein; Polyferredoxin Protein
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSTAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSNLTLAAQFVFWGIWWPFVLLS MVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGL LYGREKRVWCKYLCPVNGVFALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAGWLIDRDITWPLETNAPWFLL THYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAASTAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLR AEHVPLDWASPVRIAILVVSNMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF
Sequences:
>Translated_466_residues MSTAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSNLTLAAQFVFWGIWWPFVLLS MVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGL LYGREKRVWCKYLCPVNGVFALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAGWLIDRDITWPLETNAPWFLL THYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAASTAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLR AEHVPLDWASPVRIAILVVSNMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF >Mature_465_residues STAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSNLTLAAQFVFWGIWWPFVLLSM VMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGLL YGREKRVWCKYLCPVNGVFALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHR DAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAGWLIDRDITWPLETNAPWFLLT HYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAASTAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLRA EHVPLDWASPVRIAILVVSNMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF
Specific function: Unknown
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51897; Mature: 51765
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSN CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LTLAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCC PFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGLLYGREKRVWCKYLCPVNGVF HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHH ALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH HHHHHHCCCCEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAG CCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH WLIDRDITWPLETNAPWFLLTHYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAAS HHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLRAEHVPLDWASPVRIAILVVS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH NMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSN CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LTLAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCC PFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGLLYGREKRVWCKYLCPVNGVF HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHH ALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH HHHHHHCCCCEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAG CCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH WLIDRDITWPLETNAPWFLLTHYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAAS HHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLRAEHVPLDWASPVRIAILVVS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH NMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA