Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028099

Identifier: 238028099

GI number: 238028099

Start: 2908256

End: 2909656

Strand: Reverse

Name: 238028099

Synonym: bglu_1g25500

Alternate gene names: NA

Gene position: 2909656-2908256 (Counterclockwise)

Preceding gene: 238028100

Following gene: 238028095

Centisome position: 74.48

GC content: 68.67

Gene sequence:

>1401_bases
ATGAGTACCGCCGTGCGCGCCGCGCGCCGGAGCCGGCTCTCCGAGGTCGGCCACTGGATGCAGCGTCACGGCGGGCTGAT
TCGCGCAATCCAGTGGGTCGTGGTCGCCGTCTATGCGTTCCTGATCCTGGTGCCGGCGTTCACGCCGCTGCCCGACGACA
CGGCCCACCTGTGGAGCAATCTGACGCTGGCCGCGCAGTTCGTGTTCTGGGGCATCTGGTGGCCGTTCGTGCTGCTGTCG
ATGGTGATGCTCGGGCGCGTCTGGTGCGGCGTGCTGTGCCCCGAGGGCGCGCTTGCCGAGTTCGCCAGCAAGTTCGGCCG
CGGGCGCGCGATTCCGCGCTGGATGCGCTGGGGCGGCTGGCCCTTCGTGGCGTTCGGCATCACCACCATCTACGGGCAGA
TGGTCAGCGTCTACCAGTATCCACGCGCGGTGCTGCTGGTGCTGGGCGGCTCGACGTTCGCCGCGATGGTGATCGGGCTG
CTGTACGGGCGCGAGAAGCGCGTCTGGTGCAAGTATTTATGCCCCGTCAACGGTGTATTCGCATTGCTCGCGCGCCTGGC
GCCGCTGCGCTTCAAGGTCGACGAAGCCGCCTGGCGCCGCTCCTACACGCAGGGCGAGCATGGCCATCGCGTGATTCCGA
TCAACTGCGCGCCGCTCGTGCCGCTGCGCAACATGAAGGGCGCGGCCGCCTGCCATATGTGCGGCCGATGCAGCGGGCAC
CGCGATGCGATTGCGCTGACGCTGCGCTCACCGGCCGAGGAGGTCGTCGAGCTCGGCGACAGGCAGGCGAGCGCTTGGGA
CACCGCGCTGATCCTGTACGGTCTGCTCGGCATCGCGATCGGCGCGTTCCATTGGAGCGCGAGCCCGTGGTTCGTGGCGA
TCAAGCAGTGGCTCGCGGGCTGGCTGATCGACCGCGACATCACCTGGCCGCTCGAGACCAACGCGCCGTGGTTCCTGCTC
ACTCACTATCCGCAGCAGAACGACGTGTTTTCGTGGCTCGACGGCGGCCTCGTGGTCGGCTATATCGTCGGTACGGGCCT
GATCTACGGCACCGCGCTGCTGCTCGTGCTGGCGGCCTCGACCGCGATGCTCGGCCGCTTCGAGCGCGTCCGGCTGCACC
ATCTGGCGCAAGCGCTGATTCCGCTCGCCGGGGCCGGTGTGTTCCTCGGCCTGTCGGCGACCACGTTGTCGCTGCTGCGC
GCCGAGCACGTGCCCCTCGATTGGGCCTCGCCGGTGCGAATCGCGATCCTCGTCGTCTCGAATATGTGGAGCGCCTGGCT
GGCCTGGCGCGTGGCCGGCCGCTATGCCAGCCTGCCGCGGCGCCTGGCCGCGACGGCCGGTTTCCTGCTGGCGCTCGCGA
TCGTCGATAGCGCCTGGTGGCTGATGTTCTGGTACTTCTGA

Upstream 100 bases:

>100_bases
CGCTGACCAACCTGGTTGCCTACCTGGCCTATTGGGCGGTCGTCTACGCGCTGCTCAGGCTCACGGCGCGCCGTCCGGTC
GCCGTGGCGGGGCGGGCCGC

Downstream 100 bases:

>100_bases
CGCCTGATCGCGGACGCGGCGCGCTGGACGGTTGGCGCTTTACGTCCCGTGAACGCCGCTAAACAAAAAAAGCGGCGTGC
CCGTCCGGCACGCCGCTTTC

Product: polyferredoxin-like protein

Products: NA

Alternate protein names: Regulatory Protein; Polyferredoxin; Polyferredoxin-Like Protein; Polyferredoxin-Like; Ferredoxin; Nitrogen Assimilation Regulatory Protein; Polyferredoxin Protein

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSTAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSNLTLAAQFVFWGIWWPFVLLS
MVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGL
LYGREKRVWCKYLCPVNGVFALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH
RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAGWLIDRDITWPLETNAPWFLL
THYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAASTAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLR
AEHVPLDWASPVRIAILVVSNMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF

Sequences:

>Translated_466_residues
MSTAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSNLTLAAQFVFWGIWWPFVLLS
MVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGL
LYGREKRVWCKYLCPVNGVFALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH
RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAGWLIDRDITWPLETNAPWFLL
THYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAASTAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLR
AEHVPLDWASPVRIAILVVSNMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF
>Mature_465_residues
STAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSNLTLAAQFVFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGLL
YGREKRVWCKYLCPVNGVFALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHR
DAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAGWLIDRDITWPLETNAPWFLLT
HYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAASTAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLRA
EHVPLDWASPVRIAILVVSNMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51897; Mature: 51765

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSN
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LTLAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCC
PFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGLLYGREKRVWCKYLCPVNGVF
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
ALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH
HHHHHHCCCCEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC
RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAG
CCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WLIDRDITWPLETNAPWFLLTHYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAAS
HHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLRAEHVPLDWASPVRIAILVVS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STAVRAARRSRLSEVGHWMQRHGGLIRAIQWVVVAVYAFLILVPAFTPLPDDTAHLWSN
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LTLAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKFGRGRAIPRWMRWGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCC
PFVAFGITTIYGQMVSVYQYPRAVLLVLGGSTFAAMVIGLLYGREKRVWCKYLCPVNGVF
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
ALLARLAPLRFKVDEAAWRRSYTQGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGH
HHHHHHCCCCEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC
RDAIALTLRSPAEEVVELGDRQASAWDTALILYGLLGIAIGAFHWSASPWFVAIKQWLAG
CCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WLIDRDITWPLETNAPWFLLTHYPQQNDVFSWLDGGLVVGYIVGTGLIYGTALLLVLAAS
HHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAMLGRFERVRLHHLAQALIPLAGAGVFLGLSATTLSLLRAEHVPLDWASPVRIAILVVS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
NMWSAWLAWRVAGRYASLPRRLAATAGFLLALAIVDSAWWLMFWYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA