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The map label for this gene is ygeA [H]

Identifier: 238028039

GI number: 238028039

Start: 2829858

End: 2830301

Strand: Direct

Name: ygeA [H]

Synonym: bglu_1g24890

Alternate gene names: 238028039

Gene position: 2829858-2830301 (Clockwise)

Preceding gene: 238028038

Following gene: 238028043

Centisome position: 72.44

GC content: 67.57

Gene sequence:

>444_bases
ATGAAGACGATCGGCCTGATCGGCGGGATGAGCTGGGAATCGTCGGCGGAATACTACTGGCTGATCGACCGGCATTCGAA
AGCGCTGCACGGCGGCCACCACAACGCGAAGAGCGTGCTGATGACAGTCGACTTCGCCGAGATCGAGGCGCTGCAAAGCG
CGCACGACTGGCCCGCGCTCGGCGCCTGCATGGCCGACGCGGCGCGCCGGCTGGAGGCGGCCGGCGCCGATTTCGTGGTG
CTCGACACCAACACCATGCACCGCGTGGCCGACTCGATCGCGGCGGCCGTGACGCTGCCGTTCCTGCACGTCGCAGACCT
GGCCGGCGCGGAGCTACTGTTGTCGCCGGCGTTGGCGACGAACAGGCGCGTGCCGCCGGGCGAGACGATCACGCTGTTGT
TGCTGGTCAGCGCCTCGGCCGCAACAATGTTGCCCATGAAGTAG

Upstream 100 bases:

>100_bases
GCATCCGTACTGGTTGTTCCGGGCCGCAACCGTACCGCCGCCAGGTGCGTGCGCGGGCCAATACTCGGCAGCCCGACACC
CCAGCGCACGAGGCGCGCAA

Downstream 100 bases:

>100_bases
TTCACGCCGTTGGTGCCGCAGACGCGCGTCGCGACGCTCGGCTTCGCCGTCGGCGTACCGTCCGCATCCGAATGAAATGC
AGCACCGCGTTCTGCGGGTC

Product: Aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKTIGLIGGMSWESSAEYYWLIDRHSKALHGGHHNAKSVLMTVDFAEIEALQSAHDWPALGACMADAARRLEAAGADFVV
LDTNTMHRVADSIAAAVTLPFLHVADLAGAELLLSPALATNRRVPPGETITLLLLVSASAATMLPMK

Sequences:

>Translated_147_residues
MKTIGLIGGMSWESSAEYYWLIDRHSKALHGGHHNAKSVLMTVDFAEIEALQSAHDWPALGACMADAARRLEAAGADFVV
LDTNTMHRVADSIAAAVTLPFLHVADLAGAELLLSPALATNRRVPPGETITLLLLVSASAATMLPMK
>Mature_147_residues
MKTIGLIGGMSWESSAEYYWLIDRHSKALHGGHHNAKSVLMTVDFAEIEALQSAHDWPALGACMADAARRLEAAGADFVV
LDTNTMHRVADSIAAAVTLPFLHVADLAGAELLLSPALATNRRVPPGETITLLLLVSASAATMLPMK

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=109, Percent_Identity=54.1284403669725, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 15630; Mature: 15630

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLIGGMSWESSAEYYWLIDRHSKALHGGHHNAKSVLMTVDFAEIEALQSAHDWPAL
CCCEEEEECCCCCCCCCEEEEEECCCCHHCCCCCCCCEEEEEECHHHHHHHHHCCCCCHH
GACMADAARRLEAAGADFVVLDTNTMHRVADSIAAAVTLPFLHVADLAGAELLLSPALAT
HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHHC
NRRVPPGETITLLLLVSASAATMLPMK
CCCCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKTIGLIGGMSWESSAEYYWLIDRHSKALHGGHHNAKSVLMTVDFAEIEALQSAHDWPAL
CCCEEEEECCCCCCCCCEEEEEECCCCHHCCCCCCCCEEEEEECHHHHHHHHHCCCCCHH
GACMADAARRLEAAGADFVVLDTNTMHRVADSIAAAVTLPFLHVADLAGAELLLSPALAT
HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHHC
NRRVPPGETITLLLLVSASAATMLPMK
CCCCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]