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The map label for this gene is 238028043

Identifier: 238028043

GI number: 238028043

Start: 2833028

End: 2833576

Strand: Direct

Name: 238028043

Synonym: bglu_1g24930

Alternate gene names: NA

Gene position: 2833028-2833576 (Clockwise)

Preceding gene: 238028039

Following gene: 238028045

Centisome position: 72.52

GC content: 67.4

Gene sequence:

>549_bases
TTGTACGCAGCGGAAGACCGCCTGAAAACGCTGTTCGTCAGCGGACTCGATGGCGATGCCAAGGCCTATCACGGCTTTCT
GCAGGAGCTGACCCGTCACTTGCGCGGCTACCTGCGCAAGCGCATTCCGCAGCTGCACGACGACGTCGAGGATCTCGTCC
AGGAGATCCTGCTCGCGGTCCACCACGCGCGGCACACCTATCGCACCGACGAGCCGCTGACCGCCTGGGTCCACGCGATC
GCGCGCTACAAGCTGATGGACTTGTTCCGCTCGCGGTTCCGCCGCCAGGCGCTCGACGTGCCGTTCGACGACGATCACGA
AGCCCTGTTCACCGCCCCCGACGACGAGCCCGCCCAGGCGCGCCGCGACATCGGCAAGCTGCTCGCGCATCTGCCTGACA
AGCAGCGGCTGCCGATCCTGCACGTGAAGCTCCAGGGGCTGTCGGTAACGGAGACGGCCGCGCTGACCGGCCTCTCGGAA
TCGGCCGTGAAGGTCGGCGTGCATCGTGGGCTGAAGGCGCTGGCCGCGCGGATCCGGGGCGAACGATGA

Upstream 100 bases:

>100_bases
TAAACTCGAGCCGTCGCACCCAGGCGCGCGGTCCGCGCCGCTCAAGGTCGATGCCAGCCCGGCGGCGGCGCCGTTGCGCA
CCGCCATCACAGGACACCCC

Downstream 100 bases:

>100_bases
AAACCGGGGAAGGGATCGGCCGGCGTACTGCTGGGGCAGGCCTGCTGCGCGGGTAGCGCGACCGCGGCAGGCTCAGGCCA
CCCTGCGTCGCACACGCGGC

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor SigD; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma-E Factor Protein; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Q Factor; Extracytoplasmic Function AlteRNAtive Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Factor NccH; RNA Polymerase Sigma Subunit; RNA Polymerase Sigma Factor SigM; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MYAAEDRLKTLFVSGLDGDAKAYHGFLQELTRHLRGYLRKRIPQLHDDVEDLVQEILLAVHHARHTYRTDEPLTAWVHAI
ARYKLMDLFRSRFRRQALDVPFDDDHEALFTAPDDEPAQARRDIGKLLAHLPDKQRLPILHVKLQGLSVTETAALTGLSE
SAVKVGVHRGLKALAARIRGER

Sequences:

>Translated_182_residues
MYAAEDRLKTLFVSGLDGDAKAYHGFLQELTRHLRGYLRKRIPQLHDDVEDLVQEILLAVHHARHTYRTDEPLTAWVHAI
ARYKLMDLFRSRFRRQALDVPFDDDHEALFTAPDDEPAQARRDIGKLLAHLPDKQRLPILHVKLQGLSVTETAALTGLSE
SAVKVGVHRGLKALAARIRGER
>Mature_182_residues
MYAAEDRLKTLFVSGLDGDAKAYHGFLQELTRHLRGYLRKRIPQLHDDVEDLVQEILLAVHHARHTYRTDEPLTAWVHAI
ARYKLMDLFRSRFRRQALDVPFDDDHEALFTAPDDEPAQARRDIGKLLAHLPDKQRLPILHVKLQGLSVTETAALTGLSE
SAVKVGVHRGLKALAARIRGER

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20738; Mature: 20738

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAAEDRLKTLFVSGLDGDAKAYHGFLQELTRHLRGYLRKRIPQLHDDVEDLVQEILLAV
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HHARHTYRTDEPLTAWVHAIARYKLMDLFRSRFRRQALDVPFDDDHEALFTAPDDEPAQA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH
RRDIGKLLAHLPDKQRLPILHVKLQGLSVTETAALTGLSESAVKVGVHRGLKALAARIRG
HHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
ER
CC
>Mature Secondary Structure
MYAAEDRLKTLFVSGLDGDAKAYHGFLQELTRHLRGYLRKRIPQLHDDVEDLVQEILLAV
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HHARHTYRTDEPLTAWVHAIARYKLMDLFRSRFRRQALDVPFDDDHEALFTAPDDEPAQA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH
RRDIGKLLAHLPDKQRLPILHVKLQGLSVTETAALTGLSESAVKVGVHRGLKALAARIRG
HHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA