| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cysC [H]
Identifier: 238028038
GI number: 238028038
Start: 2829175
End: 2829696
Strand: Direct
Name: cysC [H]
Synonym: bglu_1g24880
Alternate gene names: 238028038
Gene position: 2829175-2829696 (Clockwise)
Preceding gene: 238028037
Following gene: 238028039
Centisome position: 72.42
GC content: 70.11
Gene sequence:
>522_bases GTGATCTGGATGACCGGCCTGCCCGGCGCCGGCAAGAGCACCATCGCGAAGGCGCTGCATGAAGCACTGAAGGCGCGCGG CGTGCGCACCATCATCCTCGACGGCGACACGCTGCGCGGCGGCCTCTGCTCGGACCTCGGCTTCAGCGCCGCCGACCGCA ACGAGAACATCCGCCGCTTCGCGCACGTCGCGGCGCTGTTCCGCCAGGAGAGCTACGTGGTGATCGTGGCGACGATCTCG CCGCTGCAGGCGCACCGCGACCTCGCGCGCGGCATCGTCGGCGAGGGCTTCGTCGAGACCTTCATCGCCACGCCGCTCGA CATCTGCCGCGAGCGCGATCCGAAGGGCATGTACGCGAAGGCGATGCAAGGCAAGCTCGCGCAGTTCACGGGCGTGTCCG ATACCTACGAGCAGCCCGGTGCGGCCGACGTCACGGTCGACACCTCGCAAGAGGAGGTGGCTGCCTCGGTCGAGCGCATC GCCGGACAGCTGCGCCGGCAGCGTCGGACCGCGGTGGCCTGA
Upstream 100 bases:
>100_bases TCGTGCGCTATCTGGAGCAAAACCGGATTCCGTTCGCGCGGCAGGACATTCGCGCCGAACTGGCGGCGACGCGCGCGCTT TCCTCGCGCAGGCGCATCCG
Downstream 100 bases:
>100_bases GCAGCCGCGCCGCGTCGCTACGCGGCGGCGCGGCCACCACCCCCGGCATGGTCCGCCCGCGGCATCCGTACTGGTTGTTC CGGGCCGCAACCGTACCGCC
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MIWMTGLPGAGKSTIAKALHEALKARGVRTIILDGDTLRGGLCSDLGFSAADRNENIRRFAHVAALFRQESYVVIVATIS PLQAHRDLARGIVGEGFVETFIATPLDICRERDPKGMYAKAMQGKLAQFTGVSDTYEQPGAADVTVDTSQEEVAASVERI AGQLRRQRRTAVA
Sequences:
>Translated_173_residues MIWMTGLPGAGKSTIAKALHEALKARGVRTIILDGDTLRGGLCSDLGFSAADRNENIRRFAHVAALFRQESYVVIVATIS PLQAHRDLARGIVGEGFVETFIATPLDICRERDPKGMYAKAMQGKLAQFTGVSDTYEQPGAADVTVDTSQEEVAASVERI AGQLRRQRRTAVA >Mature_173_residues MIWMTGLPGAGKSTIAKALHEALKARGVRTIILDGDTLRGGLCSDLGFSAADRNENIRRFAHVAALFRQESYVVIVATIS PLQAHRDLARGIVGEGFVETFIATPLDICRERDPKGMYAKAMQGKLAQFTGVSDTYEQPGAADVTVDTSQEEVAASVERI AGQLRRQRRTAVA
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=170, Percent_Identity=42.3529411764706, Blast_Score=138, Evalue=2e-33, Organism=Homo sapiens, GI62912492, Length=169, Percent_Identity=42.603550295858, Blast_Score=137, Evalue=5e-33, Organism=Homo sapiens, GI34447231, Length=169, Percent_Identity=42.603550295858, Blast_Score=137, Evalue=5e-33, Organism=Escherichia coli, GI1789107, Length=151, Percent_Identity=54.3046357615894, Blast_Score=166, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17542422, Length=169, Percent_Identity=42.603550295858, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6322852, Length=155, Percent_Identity=45.8064516129032, Blast_Score=144, Evalue=9e-36, Organism=Drosophila melanogaster, GI24667032, Length=169, Percent_Identity=42.603550295858, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI24667028, Length=169, Percent_Identity=42.603550295858, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI24667036, Length=169, Percent_Identity=42.603550295858, Blast_Score=142, Evalue=1e-34, Organism=Drosophila melanogaster, GI24667040, Length=169, Percent_Identity=42.603550295858, Blast_Score=141, Evalue=2e-34, Organism=Drosophila melanogaster, GI116007838, Length=169, Percent_Identity=42.603550295858, Blast_Score=141, Evalue=2e-34, Organism=Drosophila melanogaster, GI24667044, Length=169, Percent_Identity=42.603550295858, Blast_Score=141, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 18702; Mature: 18702
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWMTGLPGAGKSTIAKALHEALKARGVRTIILDGDTLRGGLCSDLGFSAADRNENIRRF CEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHH AHVAALFRQESYVVIVATISPLQAHRDLARGIVGEGFVETFIATPLDICRERDPKGMYAK HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCCHHHH AMQGKLAQFTGVSDTYEQPGAADVTVDTSQEEVAASVERIAGQLRRQRRTAVA HHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIWMTGLPGAGKSTIAKALHEALKARGVRTIILDGDTLRGGLCSDLGFSAADRNENIRRF CEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHH AHVAALFRQESYVVIVATISPLQAHRDLARGIVGEGFVETFIATPLDICRERDPKGMYAK HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCCHHHH AMQGKLAQFTGVSDTYEQPGAADVTVDTSQEEVAASVERIAGQLRRQRRTAVA HHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA