Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027989

Identifier: 238027989

GI number: 238027989

Start: 2770758

End: 2771903

Strand: Reverse

Name: 238027989

Synonym: bglu_1g24380

Alternate gene names: NA

Gene position: 2771903-2770758 (Counterclockwise)

Preceding gene: 238027990

Following gene: 238027988

Centisome position: 70.96

GC content: 68.94

Gene sequence:

>1146_bases
ATGAAACATTTCGCCTTTTCCTCTCGCGCCTTCCAGGCGTCCGTGATGGCGCTCGCGCTCGGCGCGCTGGCCGGCTGCGA
TACGCTGAACGATTATCTCGCGCCGGACCGGGTCAACTACAAGGCGACGGGCTCGGCGCCGCCGCTGGAAGTACCGAAGG
ATCTGACCGCGGTGCCGGTCAACCCGTCCTACGTGGCGCCGCCCACCAATGCCGGCCTCGGCTCGCTGCCGCAGCGCGCC
GTCACGGCGGCCGGTAACGCGACGGAAGGGCAGCCGAACGCGCAGGACCCGTTGGGCATGCACGTCGAGCGCGACGGCGA
CCGCCGCTGGCTCGTCGTCGACGGCCGCACGCCCGAGCAGCTCTGGCCGCAGCTGAAGGAATTCTGGGTCGACAACGGCT
TCGCGCTGAAGACCGACGCGCCGCAGACGGGCATCATGGCCACCGACTGGGCCGAGAACCGCGCGAATATCCCCGATGAC
TGGTTCCGGCGCACCATCGGCCGCGTGATCGATTTCGCGTATTCGTCGGGCACGCGTGACAGCTTCCGCACGCTCGTCAC
GCGCGGGCCGGACGGCTCGACCGACATCTCGATCACGCACAGCGCGATGGAGGAAGTGCTGACGGGGCCGCAGGGCGGCG
ATTCCTCGCGCTGGGTCGAGCGGCCCCGCAACCCGGTGCTCGAGGCCGTGTTCCTCACCAAGCTGATGGAGAAGTTCGGG
CTGACCGACGCGCAGGCCAAGCAGCTGCTGACCGATGCGCGCCCGGCGGCGGCACCGGCGAAGGTGGTCGACACGAGCTC
GGGCGCGCCCACGCTCGATCTGGCCGAGTCGTTCGAGCGCGCCTGGCTGCGCGTGGGGCTCGCGCTCGACCGCACCAACT
TCGCCGTCGACAACCGCGATCGTGCCAAGGGCATCTACATGGTCCGCTACGCGAATTCGGCCGAGGAACTGAAGCGCGAG
GGCGTGTTCGGCAAGCTGTTCTTCGGCGGCCCGAGCGCGGCCAAGCCCGGCAAGGAGTTTTTCGTCAGCGTGCGCGCCAA
TGGCGGTGCGCAAACGCGGGTCGCCGTGGTGGACGAGAACGGCCAGATCGACAACTCCGCCGACGCGCAGCGCATCATCA
AGCTGCTGCACGCGCAGCTGAACTGA

Upstream 100 bases:

>100_bases
GATCCGGGCGGCCGCGCCGCCCGGAGTTTCGATCCACTCCGACTCCTGTCCGGCCCGCCGGCATCGCGCGTCACCCGCGT
TTAGCAAGACGAAGGATTTC

Downstream 100 bases:

>100_bases
GCGCGTGAGATTCACGAGCCTCGGCAGCGGCAGCGAGGGCAACGCGCTCGTCGTCGAGGCCGCGTCGGGCACCACCACCA
CGCGCGTGCTGCTCGACTGC

Product: NlpBDapX family lipoprotei

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPVNPSYVAPPTNAGLGSLPQRA
VTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQLWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDD
WFRRTIGRVIDFAYSSGTRDSFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG
LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRDRAKGIYMVRYANSAEELKRE
GVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDENGQIDNSADAQRIIKLLHAQLN

Sequences:

>Translated_381_residues
MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPVNPSYVAPPTNAGLGSLPQRA
VTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQLWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDD
WFRRTIGRVIDFAYSSGTRDSFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG
LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRDRAKGIYMVRYANSAEELKRE
GVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDENGQIDNSADAQRIIKLLHAQLN
>Mature_381_residues
MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPVNPSYVAPPTNAGLGSLPQRA
VTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQLWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDD
WFRRTIGRVIDFAYSSGTRDSFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG
LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRDRAKGIYMVRYANSAEELKRE
GVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDENGQIDNSADAQRIIKLLHAQLN

Specific function: Unknown

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41315; Mature: 41315

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPV
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEECC
NPSYVAPPTNAGLGSLPQRAVTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQ
CCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH
LWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRD
HHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
SFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG
HHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC
LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRD
CCHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCEECCCC
RAKGIYMVRYANSAEELKREGVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDEN
CCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEECC
GQIDNSADAQRIIKLLHAQLN
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHFAFSSRAFQASVMALALGALAGCDTLNDYLAPDRVNYKATGSAPPLEVPKDLTAVPV
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEECC
NPSYVAPPTNAGLGSLPQRAVTAAGNATEGQPNAQDPLGMHVERDGDRRWLVVDGRTPEQ
CCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH
LWPQLKEFWVDNGFALKTDAPQTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRD
HHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
SFRTLVTRGPDGSTDISITHSAMEEVLTGPQGGDSSRWVERPRNPVLEAVFLTKLMEKFG
HHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC
LTDAQAKQLLTDARPAAAPAKVVDTSSGAPTLDLAESFERAWLRVGLALDRTNFAVDNRD
CCHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCEECCCC
RAKGIYMVRYANSAEELKREGVFGKLFFGGPSAAKPGKEFFVSVRANGGAQTRVAVVDEN
CCCCEEEEEECCCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEECC
GQIDNSADAQRIIKLLHAQLN
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]